(data stored in SCRATCH zone)

SWISSPROT: C8VMX4_EMENI

ID   C8VMX4_EMENI            Unreviewed;       467 AA.
AC   C8VMX4;
DT   03-NOV-2009, integrated into UniProtKB/TrEMBL.
DT   03-NOV-2009, sequence version 1.
DT   05-JUL-2017, entry version 43.
DE   SubName: Full=CCCH zinc finger protein (AFU_orthologue AFUA_8G05480) {ECO:0000313|EMBL:CBF85065.1};
GN   ORFNames=ANIA_01537 {ECO:0000313|EMBL:CBF85065.1};
OS   Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL
OS   194 / M139) (Aspergillus nidulans).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC   Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus.
OX   NCBI_TaxID=227321 {ECO:0000313|EMBL:CBF85065.1, ECO:0000313|Proteomes:UP000000560};
RN   [1] {ECO:0000313|Proteomes:UP000000560}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139
RC   {ECO:0000313|Proteomes:UP000000560};
RX   PubMed=16372000; DOI=10.1038/nature04341;
RA   Galagan J.E., Calvo S.E., Cuomo C., Ma L.J., Wortman J.R.,
RA   Batzoglou S., Lee S.I., Basturkmen M., Spevak C.C., Clutterbuck J.,
RA   Kapitonov V., Jurka J., Scazzocchio C., Farman M., Butler J.,
RA   Purcell S., Harris S., Braus G.H., Draht O., Busch S., D'Enfert C.,
RA   Bouchier C., Goldman G.H., Bell-Pedersen D., Griffiths-Jones S.,
RA   Doonan J.H., Yu J., Vienken K., Pain A., Freitag M., Selker E.U.,
RA   Archer D.B., Penalva M.A., Oakley B.R., Momany M., Tanaka T.,
RA   Kumagai T., Asai K., Machida M., Nierman W.C., Denning D.W.,
RA   Caddick M., Hynes M., Paoletti M., Fischer R., Miller B., Dyer P.,
RA   Sachs M.S., Osmani S.A., Birren B.W.;
RT   "Sequencing of Aspergillus nidulans and comparative analysis with A.
RT   fumigatus and A. oryzae.";
RL   Nature 438:1105-1115(2005).
RN   [2] {ECO:0000313|Proteomes:UP000000560}
RP   GENOME REANNOTATION.
RC   STRAIN=FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139
RC   {ECO:0000313|Proteomes:UP000000560};
RX   PubMed=19146970; DOI=10.1016/j.fgb.2008.12.003;
RA   Wortman J.R., Gilsenan J.M., Joardar V., Deegan J., Clutterbuck J.,
RA   Andersen M.R., Archer D., Bencina M., Braus G., Coutinho P.,
RA   von Dohren H., Doonan J., Driessen A.J., Durek P., Espeso E.,
RA   Fekete E., Flipphi M., Estrada C.G., Geysens S., Goldman G.,
RA   de Groot P.W., Hansen K., Harris S.D., Heinekamp T., Helmstaedt K.,
RA   Henrissat B., Hofmann G., Homan T., Horio T., Horiuchi H., James S.,
RA   Jones M., Karaffa L., Karanyi Z., Kato M., Keller N., Kelly D.E.,
RA   Kiel J.A., Kim J.M., van der Klei I.J., Klis F.M., Kovalchuk A.,
RA   Krasevec N., Kubicek C.P., Liu B., Maccabe A., Meyer V., Mirabito P.,
RA   Miskei M., Mos M., Mullins J., Nelson D.R., Nielsen J., Oakley B.R.,
RA   Osmani S.A., Pakula T., Paszewski A., Paulsen I., Pilsyk S., Pocsi I.,
RA   Punt P.J., Ram A.F., Ren Q., Robellet X., Robson G., Seiboth B.,
RA   van Solingen P., Specht T., Sun J., Taheri-Talesh N., Takeshita N.,
RA   Ussery D., vanKuyk P.A., Visser H., van de Vondervoort P.J.,
RA   de Vries R.P., Walton J., Xiang X., Xiong Y., Zeng A.P., Brandt B.W.,
RA   Cornell M.J., van den Hondel C.A., Visser J., Oliver S.G., Turner G.;
RT   "The 2008 update of the Aspergillus nidulans genome annotation: a
RT   community effort.";
RL   Fungal Genet. Biol. 46:S2-13(2009).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; BN001307; CBF85065.1; -; Genomic_DNA.
DR   STRING; 162425.CADANIAP00008164; -.
DR   EnsemblFungi; CADANIAT00008164; CADANIAP00008164; CADANIAG00008164.
DR   HOGENOM; HOG000158348; -.
DR   InParanoid; C8VMX4; -.
DR   OMA; RHVFECP; -.
DR   OrthoDB; EOG092C3J48; -.
DR   Proteomes; UP000000560; Chromosome VII.
DR   GO; GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IBA:GO_Central.
DR   GO; GO:0004521; F:endoribonuclease activity; IBA:GO_Central.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR   GO; GO:0006378; P:mRNA polyadenylation; IBA:GO_Central.
DR   GO; GO:0016973; P:poly(A)+ mRNA export from nucleus; IBA:GO_Central.
DR   Gene3D; 4.10.1000.10; -; 3.
DR   InterPro; IPR000571; Znf_CCCH.
DR   Pfam; PF00642; zf-CCCH; 2.
DR   SMART; SM00356; ZnF_C3H1; 4.
DR   SUPFAM; SSF90229; SSF90229; 3.
DR   PROSITE; PS50103; ZF_C3H1; 5.
PE   4: Predicted;
DR   PRODOM; C8VMX4.
DR   SWISS-2DPAGE; C8VMX4.
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000000560};
KW   Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00723};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000560};
KW   Zinc {ECO:0000256|PROSITE-ProRule:PRU00723};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00723}.
FT   DOMAIN      269    297       C3H1-type. {ECO:0000259|PROSITE:PS50103}.
FT   DOMAIN      301    324       C3H1-type. {ECO:0000259|PROSITE:PS50103}.
FT   DOMAIN      325    351       C3H1-type. {ECO:0000259|PROSITE:PS50103}.
FT   DOMAIN      352    380       C3H1-type. {ECO:0000259|PROSITE:PS50103}.
FT   DOMAIN      381    402       C3H1-type. {ECO:0000259|PROSITE:PS50103}.
FT   ZN_FING     269    297       C3H1-type. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00723}.
FT   ZN_FING     301    324       C3H1-type. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00723}.
FT   ZN_FING     325    351       C3H1-type. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00723}.
FT   ZN_FING     352    380       C3H1-type. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00723}.
FT   ZN_FING     381    402       C3H1-type. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00723}.
FT   COILED      127    157       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   467 AA;  51177 MW;  9D5E9CBEB7CF33B5 CRC64;
     MSEDQDLMAR ISQLAGQINR FKNGNTPVQS AHNEMHSNSH VSRHTSYRGR PGWAPYRGRP
     YGRGRGAAPH RHRTLILNNS ATPASKSSTP PDGMAIDTDE NSRSATPNAW VTKHARHMQL
     INSAVYDKEA QKRVKALEET RKAKAQKKAQ IEQAKVLQFA HGAGRQFSSS SNPQVSAAGE
     SHGEYQITLN DIPFRVSRGG GKLIRVSSAT PVLSALIERA GLQIVDDPNT ANNTPKRVKV
     AGVTFVRSKN GNLHRLGAVT SKRVPSAVKK KDELCQRFTT TGTCYKGPSC PYIHDPNKVA
     ICKDFLQTGK CSAGNSCDLS HEPSPHRSPA CVHFLRGRCS NPECRYAHVR VTPGAPVCRA
     FATLGYCDKG ETCEERHVHE CPDYANTGVC KKKHCRLPHV DRAGQIRKNA GPKEGEGDDE
     SDASSEEEEF DEIGSDDVDS DYLSDEGELI EGTETGEVSK QQDFIRL
//

If you have problems or comments...

PBIL Back to PBIL home page