(data stored in SCRATCH zone)

SWISSPROT: C8W3Z7_DESAS

ID   C8W3Z7_DESAS            Unreviewed;       180 AA.
AC   C8W3Z7;
DT   03-NOV-2009, integrated into UniProtKB/TrEMBL.
DT   03-NOV-2009, sequence version 1.
DT   16-JAN-2019, entry version 60.
DE   RecName: Full=50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333};
GN   Name=rplE {ECO:0000256|HAMAP-Rule:MF_01333};
GN   OrderedLocusNames=Dtox_0298 {ECO:0000313|EMBL:ACV61251.1};
OS   Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM
OS   B-1644) (Desulfofarcimen acetoxidans).
OC   Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae;
OC   Desulfofarcimen.
OX   NCBI_TaxID=485916 {ECO:0000313|EMBL:ACV61251.1, ECO:0000313|Proteomes:UP000002217};
RN   [1] {ECO:0000313|EMBL:ACV61251.1, ECO:0000313|Proteomes:UP000002217}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 49208 / DSM 771 / VKM B-1644
RC   {ECO:0000313|Proteomes:UP000002217};
RX   PubMed=21304664; DOI=10.4056/sigs.39508;
RA   Spring S., Lapidus A., Schroder M., Gleim D., Sims D., Meincke L.,
RA   Glavina Del Rio T., Tice H., Copeland A., Cheng J.F., Lucas S.,
RA   Chen F., Nolan M., Bruce D., Goodwin L., Pitluck S., Ivanova N.,
RA   Mavromatis K., Mikhailova N., Pati A., Chen A., Palaniappan K.,
RA   Land M., Hauser L., Chang Y.J., Jeffries C.D., Chain P., Saunders E.,
RA   Brettin T., Detter J.C., Goker M., Bristow J., Eisen J.A.,
RA   Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P., Han C.;
RT   "Complete genome sequence of Desulfotomaculum acetoxidans type strain
RT   (5575).";
RL   Stand. Genomic Sci. 1:242-253(2009).
CC   -!- FUNCTION: This is 1 of the proteins that binds and probably
CC       mediates the attachment of the 5S RNA into the large ribosomal
CC       subunit, where it forms part of the central protuberance. In the
CC       70S ribosome it contacts protein S13 of the 30S subunit (bridge
CC       B1b), connecting the 2 subunits; this bridge is implicated in
CC       subunit movement. Contacts the P site tRNA; the 5S rRNA and some
CC       of its associated proteins might help stabilize positioning of
CC       ribosome-bound tRNAs. {ECO:0000256|HAMAP-Rule:MF_01333}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit; part of the 5S
CC       rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA and the P site
CC       tRNA. Forms a bridge to the 30S subunit in the 70S ribosome.
CC       {ECO:0000256|HAMAP-Rule:MF_01333}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL5 family.
CC       {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003930}.
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DR   EMBL; CP001720; ACV61251.1; -; Genomic_DNA.
DR   RefSeq; WP_015755972.1; NC_013216.1.
DR   STRING; 485916.Dtox_0298; -.
DR   EnsemblBacteria; ACV61251; ACV61251; Dtox_0298.
DR   KEGG; dae:Dtox_0298; -.
DR   eggNOG; ENOG4105CW6; Bacteria.
DR   eggNOG; COG0094; LUCA.
DR   HOGENOM; HOG000231311; -.
DR   KO; K02931; -.
DR   OMA; EQVMFHE; -.
DR   OrthoDB; 1456375at2; -.
DR   BioCyc; DACE485916:G1GFV-313-MONOMER; -.
DR   Proteomes; UP000002217; Chromosome.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.30.1440.10; -; 1.
DR   HAMAP; MF_01333_B; Ribosomal_L5_B; 1.
DR   InterPro; IPR002132; Ribosomal_L5.
DR   InterPro; IPR020930; Ribosomal_L5_bac-type.
DR   InterPro; IPR031309; Ribosomal_L5_C.
DR   InterPro; IPR020929; Ribosomal_L5_CS.
DR   InterPro; IPR022803; Ribosomal_L5_dom_sf.
DR   InterPro; IPR031310; Ribosomal_L5_N.
DR   PANTHER; PTHR11994; PTHR11994; 1.
DR   Pfam; PF00281; Ribosomal_L5; 1.
DR   Pfam; PF00673; Ribosomal_L5_C; 1.
DR   PIRSF; PIRSF002161; Ribosomal_L5; 1.
DR   SUPFAM; SSF55282; SSF55282; 1.
DR   PROSITE; PS00358; RIBOSOMAL_L5; 1.
PE   3: Inferred from homology;
DR   PRODOM; C8W3Z7.
DR   SWISS-2DPAGE; C8W3Z7.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002217};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002217};
KW   Ribonucleoprotein {ECO:0000256|HAMAP-Rule:MF_01333,
KW   ECO:0000256|RuleBase:RU003930};
KW   Ribosomal protein {ECO:0000256|HAMAP-Rule:MF_01333,
KW   ECO:0000256|RuleBase:RU003930, ECO:0000313|EMBL:ACV61251.1};
KW   RNA-binding {ECO:0000256|HAMAP-Rule:MF_01333};
KW   rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01333};
KW   tRNA-binding {ECO:0000256|HAMAP-Rule:MF_01333}.
FT   DOMAIN       24     80       Ribosomal_L5. {ECO:0000259|Pfam:PF00281}.
FT   DOMAIN       84    177       Ribosomal_L5_C. {ECO:0000259|Pfam:
FT                                PF00673}.
SQ   SEQUENCE   180 AA;  20196 MW;  1653C57AE47E8F80 CRC64;
     MVRLKDKYNN EIVSAMQNKF GYKNIMEVPK LEKVVVNMGV GEAAQNSKAI DAAVGDMVKI
     TGQKPIVTKA KKSIAAFKLR AGMPIGCKTT LRGERMYEFA DKLVSIVLPR VRDFRGVSPK
     SFDGRGNYTL GLREQIIFPE IEYDKVDKIR GMDIIFVTTA KTDEEGRELL RLMGMPFKAN
//

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