(data stored in SCRATCH zone)

SWISSPROT: C8W5X0_DESAS

ID   C8W5X0_DESAS            Unreviewed;       175 AA.
AC   C8W5X0;
DT   03-NOV-2009, integrated into UniProtKB/TrEMBL.
DT   03-NOV-2009, sequence version 1.
DT   08-MAY-2019, entry version 64.
DE   SubName: Full=RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACV61425.1};
GN   OrderedLocusNames=Dtox_0502 {ECO:0000313|EMBL:ACV61425.1};
OS   Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM
OS   B-1644) (Desulfofarcimen acetoxidans).
OC   Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae;
OC   Desulfofarcimen.
OX   NCBI_TaxID=485916 {ECO:0000313|EMBL:ACV61425.1, ECO:0000313|Proteomes:UP000002217};
RN   [1] {ECO:0000313|EMBL:ACV61425.1, ECO:0000313|Proteomes:UP000002217}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 49208 / DSM 771 / VKM B-1644
RC   {ECO:0000313|Proteomes:UP000002217};
RX   PubMed=21304664; DOI=10.4056/sigs.39508;
RA   Spring S., Lapidus A., Schroder M., Gleim D., Sims D., Meincke L.,
RA   Glavina Del Rio T., Tice H., Copeland A., Cheng J.F., Lucas S.,
RA   Chen F., Nolan M., Bruce D., Goodwin L., Pitluck S., Ivanova N.,
RA   Mavromatis K., Mikhailova N., Pati A., Chen A., Palaniappan K.,
RA   Land M., Hauser L., Chang Y.J., Jeffries C.D., Chain P., Saunders E.,
RA   Brettin T., Detter J.C., Goker M., Bristow J., Eisen J.A.,
RA   Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P., Han C.;
RT   "Complete genome sequence of Desulfotomaculum acetoxidans type strain
RT   (5575).";
RL   Stand. Genomic Sci. 1:242-253(2009).
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC       {ECO:0000256|SAAS:SAAS01160068}.
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DR   EMBL; CP001720; ACV61425.1; -; Genomic_DNA.
DR   RefSeq; WP_015756144.1; NC_013216.1.
DR   STRING; 485916.Dtox_0502; -.
DR   EnsemblBacteria; ACV61425; ACV61425; Dtox_0502.
DR   KEGG; dae:Dtox_0502; -.
DR   eggNOG; ENOG410601Y; Bacteria.
DR   eggNOG; COG1595; LUCA.
DR   HOGENOM; HOG000262675; -.
DR   KO; K03088; -.
DR   OMA; IVQRYYL; -.
DR   OrthoDB; 1914729at2; -.
DR   BioCyc; DACE485916:G1GFV-508-MONOMER; -.
DR   Proteomes; UP000002217; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR039425; RNA_pol_sigma-70.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   PANTHER; PTHR43133; PTHR43133; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF08281; Sigma70_r4_2; 1.
DR   SUPFAM; SSF88659; SSF88659; 1.
DR   SUPFAM; SSF88946; SSF88946; 1.
DR   TIGRFAMs; TIGR02937; sigma70-ECF; 1.
PE   3: Inferred from homology;
DR   PRODOM; C8W5X0.
DR   SWISS-2DPAGE; C8W5X0.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002217};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00611263};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002217};
KW   Sigma factor {ECO:0000256|SAAS:SAAS00611278};
KW   Transcription {ECO:0000256|SAAS:SAAS00611290};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00611294}.
FT   DOMAIN       11     76       Sigma70_r2. {ECO:0000259|Pfam:PF04542}.
FT   DOMAIN      105    154       Sigma70_r4_2. {ECO:0000259|Pfam:PF08281}.
SQ   SEQUENCE   175 AA;  20451 MW;  26BE39F0B579B13C CRC64;
     MINKYSKIIF TLYYKVAYNA AYFYCGDKYI AEEAAQEAIL KAIQNIHQLR DPNKIEPWIK
     KIAINNTITL FRKHKKVLSL ENSMPISDSQ DNLPEYFIDS QETLNAVRMA IDSLNPVMKQ
     VIYLRFYEEM KIKDISLMLK KPENTIRTII HRGKISIKKK LISEGYLELK EGGIK
//

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