(data stored in SCRATCH zone)

SWISSPROT: YAAK_BACSU

ID   YAAK_BACSU              Reviewed;         107 AA.
AC   P24281;
DT   01-MAR-1992, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-1992, sequence version 1.
DT   11-DEC-2019, entry version 123.
DE   RecName: Full=Nucleoid-associated protein YaaK {ECO:0000255|HAMAP-Rule:MF_00274};
GN   Name=yaaK; OrderedLocusNames=BSU00200;
OS   Bacillus subtilis (strain 168).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX   NCBI_TaxID=224308;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=168 / YB886 / BG214;
RX   PubMed=2124672; DOI=10.1093/nar/18.23.6771;
RA   Alonso J.C., Shirahige K., Ogasawara N.;
RT   "Molecular cloning, genetic characterization and DNA sequence analysis of
RT   the recM region of Bacillus subtilis.";
RL   Nucleic Acids Res. 18:6771-6777(1990).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=168;
RX   PubMed=7584024; DOI=10.1093/dnares/1.1.1;
RA   Ogasawara N., Nakai S., Yoshikawa H.;
RT   "Systematic sequencing of the 180 kilobase region of the Bacillus subtilis
RT   chromosome containing the replication origin.";
RL   DNA Res. 1:1-14(1994).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=168;
RX   PubMed=9384377; DOI=10.1038/36786;
RA   Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA   Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA   Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA   Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA   Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA   Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA   Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA   Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA   Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA   Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA   Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA   Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA   Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA   Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA   Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA   Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA   Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA   Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA   Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA   Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA   Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA   Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA   Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA   Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA   Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA   Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA   Yoshikawa H., Danchin A.;
RT   "The complete genome sequence of the Gram-positive bacterium Bacillus
RT   subtilis.";
RL   Nature 390:249-256(1997).
CC   -!- FUNCTION: Binds to DNA and alters its conformation. May be involved in
CC       regulation of gene expression, nucleoid organization and DNA
CC       protection. {ECO:0000255|HAMAP-Rule:MF_00274}.
CC   -!- SUBUNIT: Homodimer. {ECO:0000255|HAMAP-Rule:MF_00274}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm, nucleoid {ECO:0000255|HAMAP-
CC       Rule:MF_00274}.
CC   -!- SIMILARITY: Belongs to the YbaB/EbfC family. {ECO:0000255|HAMAP-
CC       Rule:MF_00274}.
DR   EMBL; X17014; CAA34878.1; -; Genomic_DNA.
DR   EMBL; D26185; BAA05256.1; -; Genomic_DNA.
DR   EMBL; AL009126; CAB11796.1; -; Genomic_DNA.
DR   PIR; S13787; S13787.
DR   RefSeq; NP_387901.1; NC_000964.3.
DR   RefSeq; WP_003225427.1; NZ_JNCM01000024.1.
DR   SMR; P24281; -.
DR   STRING; 224308.BSU00200; -.
DR   jPOST; P24281; -.
DR   PaxDb; P24281; -.
DR   PRIDE; P24281; -.
DR   EnsemblBacteria; CAB11796; CAB11796; BSU00200.
DR   GeneID; 937027; -.
DR   KEGG; bsu:BSU00200; -.
DR   PATRIC; fig|224308.179.peg.20; -.
DR   eggNOG; ENOG410816I; Bacteria.
DR   eggNOG; COG0718; LUCA.
DR   HOGENOM; HOG000293240; -.
DR   InParanoid; P24281; -.
DR   KO; K09747; -.
DR   OMA; MGNMMKQ; -.
DR   PhylomeDB; P24281; -.
DR   BioCyc; BSUB:BSU00200-MONOMER; -.
DR   Proteomes; UP000001570; Chromosome.
DR   GO; GO:0043590; C:bacterial nucleoid; IEA:UniProtKB-UniRule.
DR   GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR   GO; GO:0003677; F:DNA binding; IBA:GO_Central.
DR   Gene3D; 3.30.1310.10; -; 1.
DR   HAMAP; MF_00274; DNA_YbaB_EbfC; 1.
DR   InterPro; IPR036894; YbaB-like_sf.
DR   InterPro; IPR004401; YbaB/EbfC.
DR   PANTHER; PTHR33449; PTHR33449; 1.
DR   Pfam; PF02575; YbaB_DNA_bd; 1.
DR   PIRSF; PIRSF004555; UCP004555; 1.
DR   SUPFAM; SSF82607; SSF82607; 1.
DR   TIGRFAMs; TIGR00103; DNA_YbaB_EbfC; 1.
PE   3: Inferred from homology;
DR   PRODOM; P24281.
DR   SWISS-2DPAGE; P24281.
KW   Cytoplasm; DNA-binding; Reference proteome.
FT   CHAIN           1..107
FT                   /note="Nucleoid-associated protein YaaK"
FT                   /id="PRO_0000170365"
SQ   SEQUENCE   107 AA;  11781 MW;  DB3EBA3420F6A9E6 CRC64;
     MRGGMGNMQK MMKQMQKMQK DMAKAQEELA EKVVEGTAGG GMVTVKANGQ KEILDVIIKE
     EVVDPEDIDM LQDLVLAATN EALKKVDEIT NETMGQFTKG MNMPGLF
//

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