(data stored in ACNUC7421 zone)

SWISSPROT: YBBH_BACSU

ID   YBBH_BACSU              Reviewed;         283 AA.
AC   Q45581; Q45580;
DT   30-MAY-2000, integrated into UniProtKB/Swiss-Prot.
DT   03-JUL-2003, sequence version 3.
DT   11-DEC-2019, entry version 123.
DE   RecName: Full=Uncharacterized HTH-type transcriptional regulator YbbH;
GN   Name=ybbH; OrderedLocusNames=BSU01690;
OS   Bacillus subtilis (strain 168).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX   NCBI_TaxID=224308;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=168;
RX   PubMed=9274029; DOI=10.1099/00221287-143-8-2763;
RA   Liu H., Haga K., Yasumoto K., Ohashi Y., Yoshikawa H., Takahashi H.;
RT   "Sequence and analysis of a 31 kb segment of the Bacillus subtilis
RT   chromosome in the area of the rrnH and rrnG operons.";
RL   Microbiology 143:2763-2767(1997).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=168;
RX   PubMed=9384377; DOI=10.1038/36786;
RA   Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA   Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA   Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA   Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA   Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA   Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA   Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA   Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA   Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA   Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA   Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA   Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA   Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA   Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA   Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA   Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA   Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA   Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA   Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA   Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA   Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA   Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA   Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA   Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA   Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA   Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA   Yoshikawa H., Danchin A.;
RT   "The complete genome sequence of the Gram-positive bacterium Bacillus
RT   subtilis.";
RL   Nature 390:249-256(1997).
CC   -!- SEQUENCE CAUTION:
CC       Sequence=BAA19503.1; Type=Erroneous initiation; Evidence={ECO:0000305};
DR   EMBL; AB002150; BAA19503.1; ALT_INIT; Genomic_DNA.
DR   EMBL; AL009126; CAB11945.1; -; Genomic_DNA.
DR   PIR; C69744; C69744.
DR   RefSeq; NP_388050.1; NC_000964.3.
DR   RefSeq; WP_003234966.1; NZ_JNCM01000030.1.
DR   PDB; 2O3F; X-ray; 1.75 A; A/B/C=1-108.
DR   PDBsum; 2O3F; -.
DR   SMR; Q45581; -.
DR   STRING; 224308.BSU01690; -.
DR   PaxDb; Q45581; -.
DR   PRIDE; Q45581; -.
DR   EnsemblBacteria; CAB11945; CAB11945; BSU01690.
DR   GeneID; 938885; -.
DR   KEGG; bsu:BSU01690; -.
DR   PATRIC; fig|224308.179.peg.175; -.
DR   eggNOG; COG1737; LUCA.
DR   HOGENOM; HOG000027157; -.
DR   InParanoid; Q45581; -.
DR   OMA; RGPRFRE; -.
DR   PhylomeDB; Q45581; -.
DR   BioCyc; BSUB:BSU01690-MONOMER; -.
DR   EvolutionaryTrace; Q45581; -.
DR   Proteomes; UP000001570; Chromosome.
DR   GO; GO:0097367; F:carbohydrate derivative binding; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR   GO; GO:1901135; P:carbohydrate derivative metabolic process; IEA:InterPro.
DR   CDD; cd05013; SIS_RpiR; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR000281; HTH_RpiR.
DR   InterPro; IPR035472; RpiR-like_SIS.
DR   InterPro; IPR001347; SIS.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   Pfam; PF01418; HTH_6; 1.
DR   Pfam; PF01380; SIS; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   PROSITE; PS51071; HTH_RPIR; 1.
DR   PROSITE; PS51464; SIS; 1.
PE   1: Evidence at protein level;
DR   PRODOM; Q45581.
DR   SWISS-2DPAGE; Q45581.
KW   3D-structure; DNA-binding; Reference proteome; Transcription;
KW   Transcription regulation.
FT   CHAIN           1..283
FT                   /note="Uncharacterized HTH-type transcriptional regulator
FT                   YbbH"
FT                   /id="PRO_0000068629"
FT   DOMAIN          3..79
FT                   /note="HTH rpiR-type"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00390"
FT   DOMAIN          123..264
FT                   /note="SIS"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00797"
FT   DNA_BIND        39..58
FT                   /note="H-T-H motif"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00390"
FT   HELIX           5..12
FT                   /evidence="ECO:0000244|PDB:2O3F"
FT   HELIX           18..29
FT                   /evidence="ECO:0000244|PDB:2O3F"
FT   HELIX           39..45
FT                   /evidence="ECO:0000244|PDB:2O3F"
FT   HELIX           50..57
FT                   /evidence="ECO:0000244|PDB:2O3F"
FT   HELIX           65..68
FT                   /evidence="ECO:0000244|PDB:2O3F"
FT   HELIX           71..77
FT                   /evidence="ECO:0000244|PDB:2O3F"
FT   HELIX           79..81
FT                   /evidence="ECO:0000244|PDB:2O3F"
SQ   SEQUENCE   283 AA;  30709 MW;  690C68B78BF19032 CRC64;
     MATGGLAIIQ SMKHKLPPSE RKLADYILAH PHKAIESTVN EISALANSSD AAVIRLCKSL
     GLKGFQDLKM RVAGDLAKPT FQGYRDIVPH EPLPSISEKT AGNAIQAIQD TSDLMDYKEL
     ERAVSLLLKA HTVHFIGLGA SGIVAKDAQQ KWLRIHKQAT AFTDTHLVAS LIANADKDDI
     VFAISFSGET QEIVELFAMA KEKGITTISL TQFSQTSVSA LADVPLYTAH SNEALIRSAA
     TSSRLAQLFI IDVLFLGMAA EQYETTTGYI DKTRAAIQSM RIK
//

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