(data stored in SCRATCH zone)

SWISSPROT: WRK34_ARATH

ID   WRK34_ARATH             Reviewed;         568 AA.
AC   O65590;
DT   11-APR-2003, integrated into UniProtKB/Swiss-Prot.
DT   01-AUG-1998, sequence version 1.
DT   11-DEC-2019, entry version 128.
DE   RecName: Full=Probable WRKY transcription factor 34;
DE   AltName: Full=WRKY DNA-binding protein 34;
GN   Name=WRKY34; OrderedLocusNames=At4g26440; ORFNames=M3E9.130;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA].
RC   STRAIN=cv. Columbia; TISSUE=Flower;
RA   Ulker B., Kushnir S., Somssich I.E.;
RT   "Arabidopsis thaliana transcription factor WRKY34.";
RL   Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10617198; DOI=10.1038/47134;
RA   Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA   Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA   Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA   de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA   Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA   Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA   Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA   Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA   Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA   Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA   Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA   Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA   Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA   Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA   Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA   Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA   Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA   Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA   Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA   Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA   Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA   Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA   Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA   Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA   Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA   Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA   Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA   de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA   Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA   Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA   Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA   Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA   Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA   Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA   Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA   Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA   Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA   O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA   Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA   Martienssen R., McCombie W.R.;
RT   "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL   Nature 402:769-777(1999).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
CC   -!- FUNCTION: Transcription factor. Interacts specifically with the W box
CC       (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-
CC       acting element. {ECO:0000250|UniProtKB:Q9SI37}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q9SI37}.
CC   -!- SIMILARITY: Belongs to the WRKY group I family. {ECO:0000305}.
DR   EMBL; AY052649; AAL11010.1; -; mRNA.
DR   EMBL; AL022223; CAA18226.1; -; Genomic_DNA.
DR   EMBL; AL161565; CAB79499.1; -; Genomic_DNA.
DR   EMBL; CP002687; AEE85199.1; -; Genomic_DNA.
DR   PIR; T05060; T05060.
DR   RefSeq; NP_194374.1; NM_118777.2.
DR   SMR; O65590; -.
DR   BioGrid; 14037; 1.
DR   STRING; 3702.AT4G26440.1; -.
DR   iPTMnet; O65590; -.
DR   PaxDb; O65590; -.
DR   PRIDE; O65590; -.
DR   EnsemblPlants; AT4G26440.1; AT4G26440.1; AT4G26440.
DR   GeneID; 828750; -.
DR   Gramene; AT4G26440.1; AT4G26440.1; AT4G26440.
DR   KEGG; ath:AT4G26440; -.
DR   Araport; AT4G26440; -.
DR   TAIR; locus:2131503; AT4G26440.
DR   eggNOG; ENOG410JV1J; Eukaryota.
DR   eggNOG; ENOG41106BK; LUCA.
DR   HOGENOM; HOG000242409; -.
DR   InParanoid; O65590; -.
DR   OMA; GSMQVQN; -.
DR   OrthoDB; 478624at2759; -.
DR   PhylomeDB; O65590; -.
DR   PRO; PR:O65590; -.
DR   Proteomes; UP000006548; Chromosome 4.
DR   ExpressionAtlas; O65590; baseline and differential.
DR   Genevisible; O65590; AT.
DR   GO; GO:0005634; C:nucleus; IDA:TAIR.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0044212; F:transcription regulatory region DNA binding; IPI:TAIR.
DR   GO; GO:0009555; P:pollen development; IGI:TAIR.
DR   GO; GO:0009846; P:pollen germination; IMP:TAIR.
DR   GO; GO:0009409; P:response to cold; IEP:TAIR.
DR   Gene3D; 2.20.25.80; -; 2.
DR   InterPro; IPR003657; WRKY_dom.
DR   InterPro; IPR036576; WRKY_dom_sf.
DR   Pfam; PF03106; WRKY; 2.
DR   SMART; SM00774; WRKY; 2.
DR   SUPFAM; SSF118290; SSF118290; 2.
DR   PROSITE; PS50811; WRKY; 2.
PE   2: Evidence at transcript level;
DR   PRODOM; O65590.
DR   SWISS-2DPAGE; O65590.
KW   DNA-binding; Metal-binding; Nucleus; Reference proteome; Repeat;
KW   Transcription; Transcription regulation; Zinc.
FT   CHAIN           1..568
FT                   /note="Probable WRKY transcription factor 34"
FT                   /id="PRO_0000133676"
FT   DNA_BIND        172..236
FT                   /note="WRKY 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00223"
FT   DNA_BIND        366..431
FT                   /note="WRKY 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00223"
FT   METAL           203
FT                   /note="Zinc"
FT                   /evidence="ECO:0000250|UniProtKB:Q9SI37"
FT   METAL           208
FT                   /note="Zinc"
FT                   /evidence="ECO:0000250|UniProtKB:Q9SI37"
FT   METAL           231
FT                   /note="Zinc; via pros nitrogen"
FT                   /evidence="ECO:0000250|UniProtKB:Q9SI37"
FT   METAL           233
FT                   /note="Zinc; via tele nitrogen"
FT                   /evidence="ECO:0000250|UniProtKB:Q9SI37"
FT   METAL           397
FT                   /note="Zinc"
FT                   /evidence="ECO:0000250|UniProtKB:Q9SI37"
FT   METAL           402
FT                   /note="Zinc"
FT                   /evidence="ECO:0000250|UniProtKB:Q9SI37"
FT   METAL           426
FT                   /note="Zinc; via pros nitrogen"
FT                   /evidence="ECO:0000250|UniProtKB:Q9SI37"
FT   METAL           428
FT                   /note="Zinc; via tele nitrogen"
FT                   /evidence="ECO:0000250|UniProtKB:Q9SI37"
SQ   SEQUENCE   568 AA;  62167 MW;  31F350AA46341F7B CRC64;
     MAGIDNKAAV MGEWFDCSTT NHRKRSKAEL GREFSLNYIK NEDSLQTTFQ ESSRGALRER
     IAARSGFNAP WLNTEDILQS KSLTISSPGL SPATLLESPV FLSNPLLSPT TGKLSSVPSD
     KAKAELFDDI TTSLAFQTIS GSGLDPTNIA LEPDDSQDYE ERQLGGLGDS MACCAPADDG
     YNWRKYGQKL VKGSEYPRSY YKCTHPNCEA KKKVERSREG HIIEIIYTGD HIHSKPPPNR
     RSGIGSSGTG QDMQIDATEY EGFAGTNENI EWTSPVSAEL EYGSHSGSMQ VQNGTHQFGY
     GDAAADALYR DENEDDRTSH MSVSLTYDGE VEESESKRRK LEAYATETSG STRASREPRV
     VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTAN GCTVTKHVER ASDDFKSVLT
     TYIGKHTHVV PAARNSSHVG AGSSGTLQGS LATQTHNHNV HYPMPHSRSE GLATANSSLF
     DFQSHLRHPT GFSVYIGQSE LSDLSMPGLT IGQEKLTSLQ APDIGDPTGL MLQLAAQPKV
     EPVSPQQGLD LSASSLICRE MLSRLRQI
//

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