(data stored in SCRATCH zone)

SWISSPROT: OPT5_ARATH

ID   OPT5_ARATH              Reviewed;         753 AA.
AC   Q9SUA4;
DT   07-JUN-2005, integrated into UniProtKB/Swiss-Prot.
DT   01-MAY-2000, sequence version 1.
DT   11-DEC-2019, entry version 98.
DE   RecName: Full=Oligopeptide transporter 5;
DE            Short=AtOPT5;
GN   Name=OPT5; OrderedLocusNames=At4g26590; ORFNames=T15N24.40;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10617198; DOI=10.1038/47134;
RA   Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA   Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA   Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA   de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA   Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA   Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA   Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA   Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA   Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA   Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA   Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA   Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA   Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA   Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA   Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA   Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA   Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA   Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA   Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA   Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA   Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA   Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA   Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA   Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA   Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA   Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA   Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA   de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA   Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA   Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA   Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA   Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA   Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA   Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA   Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA   Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA   Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA   O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA   Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA   Martienssen R., McCombie W.R.;
RT   "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL   Nature 402:769-777(1999).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=14593172; DOI=10.1126/science.1088305;
RA   Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA   Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA   Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA   Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA   Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA   Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA   Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA   Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA   Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA   Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA   Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA   Ecker J.R.;
RT   "Empirical analysis of transcriptional activity in the Arabidopsis
RT   genome.";
RL   Science 302:842-846(2003).
RN   [4]
RP   FUNCTION, NOMENCLATURE, AND TISSUE SPECIFICITY.
RX   PubMed=11788749; DOI=10.1104/pp.128.1.21;
RA   Koh S., Wiles A.M., Sharp J.S., Naider F.R., Becker J.M., Stacey G.;
RT   "An oligopeptide transporter gene family in Arabidopsis.";
RL   Plant Physiol. 128:21-29(2002).
CC   -!- FUNCTION: Involved in the translocation of tetra- and pentapeptides
CC       across the cellular membrane in an energy-dependent manner.
CC       {ECO:0000269|PubMed:11788749}.
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC       protein {ECO:0000305}.
CC   -!- TISSUE SPECIFICITY: Expressed predominantly in flowers, and at a very
CC       low level in leaves and roots. {ECO:0000269|PubMed:11788749}.
CC   -!- SIMILARITY: Belongs to the oligopeptide OPT transporter (TC 2.A.67.1)
CC       family. {ECO:0000305}.
DR   EMBL; AL078465; CAB43855.1; -; Genomic_DNA.
DR   EMBL; AL161565; CAB79514.1; -; Genomic_DNA.
DR   EMBL; CP002687; AEE85224.1; -; Genomic_DNA.
DR   EMBL; AY051048; AAK93725.1; -; mRNA.
DR   EMBL; AF360292; AAK26002.1; -; mRNA.
DR   PIR; T08925; T08925.
DR   RefSeq; NP_194389.1; NM_118793.3.
DR   STRING; 3702.AT4G26590.1; -.
DR   PaxDb; Q9SUA4; -.
DR   PRIDE; Q9SUA4; -.
DR   EnsemblPlants; AT4G26590.1; AT4G26590.1; AT4G26590.
DR   GeneID; 828766; -.
DR   Gramene; AT4G26590.1; AT4G26590.1; AT4G26590.
DR   KEGG; ath:AT4G26590; -.
DR   Araport; AT4G26590; -.
DR   TAIR; locus:2133882; AT4G26590.
DR   eggNOG; KOG2262; Eukaryota.
DR   eggNOG; ENOG410XNZC; LUCA.
DR   HOGENOM; HOG000166970; -.
DR   InParanoid; Q9SUA4; -.
DR   OMA; FDWAQVV; -.
DR   OrthoDB; 190227at2759; -.
DR   PhylomeDB; Q9SUA4; -.
DR   PRO; PR:Q9SUA4; -.
DR   Proteomes; UP000006548; Chromosome 4.
DR   ExpressionAtlas; Q9SUA4; baseline and differential.
DR   Genevisible; Q9SUA4; AT.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0016020; C:membrane; ISS:TAIR.
DR   GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR   GO; GO:0055085; P:transmembrane transport; IEA:InterPro.
DR   InterPro; IPR004648; Oligpept_transpt.
DR   InterPro; IPR004813; OPT.
DR   Pfam; PF03169; OPT; 1.
DR   TIGRFAMs; TIGR00727; ISP4_OPT; 1.
DR   TIGRFAMs; TIGR00728; OPT_sfam; 1.
PE   2: Evidence at transcript level;
DR   PRODOM; Q9SUA4.
DR   SWISS-2DPAGE; Q9SUA4.
KW   Membrane; Peptide transport; Protein transport; Reference proteome;
KW   Transmembrane; Transmembrane helix; Transport.
FT   CHAIN           1..753
FT                   /note="Oligopeptide transporter 5"
FT                   /id="PRO_0000213782"
FT   TRANSMEM        56..76
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        80..100
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        132..152
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        163..183
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        224..244
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        296..316
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        368..388
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        432..452
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        461..481
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        506..528
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        544..564
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        583..603
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        615..635
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        662..682
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        695..715
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
SQ   SEQUENCE   753 AA;  84890 MW;  1E6F351FA7E28DED CRC64;
     MVGSLEVSKP PEHKVESKIV IADEEEEDEN DSPIEEVRLT VPITDDPSLP VLTFRTWFLG
     MVSCVVLAFV NNFFGYRSNP LTVSSVVAQI ITLPLGKLMA TTLPTTKLRL PGTNWSCSLN
     PGPFNMKEHV LITIFANTGA GGAYATSILT IVKAFYHRNL NPAAAMLLVQ TTQLLGYGWA
     GMFRKYLVDS PYMWWPANLV QVSLFRALHE KEEKREGKQT KLRFFLIVFF LSFTYYIVPG
     YLFPSISYLS FVCWIWTRSV TAQQIGSGLH GLGIGSFGLD WSTVAGFLGS PLAVPFFAIA
     NSFGGFIIFF YIILPIFYWS NAYEAKKFPF YTSHPFDHTG QRYNTTRILN QKTFNIDLPA
     YESYSKLYLS ILFALIYGLS FGTLTATISH VALFDGKFIW ELWKKATLTT KDKFGDVHTR
     LMKKNYKEVP QWWFVAVLAA SFVLALYACE GFGKQLQLPW WGLLLACAIA FTFTLPIGVI
     LATTNQRMGL NVISELIIGF LYPGKPLANV AFKTYGSVSI AQALYFVGDF KLGHYMKIPP
     RSMFIVQLVA TIVASTVSFG TTWWLLSSVE NICNTDMLPK SSPWTCPGDV VFYNASIIWG
     IIGPGRMFTS KGIYPGMNWF FLIGFLAPVP VWFFARKFPE KKWIHQIHIP LIFSGANVMP
     MAKAVHYWSW FAVGIVFNYY IFRRYKGWWA RHNYILSAAL DAGTAVMGVL IYFALQNNNI
     SLPDWWGNEN TDHCPLANCP TEKGIVAKGC PVF
//

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