(data stored in ACNUC1104 zone)

SWISSPROT: Q93JJ8_STRCO

ID   Q93JJ8_STRCO            Unreviewed;       169 AA.
AC   Q93JJ8;
DT   01-DEC-2001, integrated into UniProtKB/TrEMBL.
DT   01-DEC-2001, sequence version 1.
DT   11-DEC-2019, entry version 101.
DE   SubName: Full=Putative RNA polymerase ECF sigma factor {ECO:0000313|EMBL:CAC40609.1};
DE   SubName: Full=RNA polymerase sigma-70 factor (Sigma-E family) {ECO:0000313|EMBL:TYP03716.1};
GN   OrderedLocusNames=SCO4996 {ECO:0000313|EMBL:CAC40609.1};
GN   ORFNames=FHV98_12777 {ECO:0000313|EMBL:TYP03716.1};
OS   Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145).
OC   Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae;
OC   Streptomyces; Streptomyces albidoflavus group.
OX   NCBI_TaxID=100226 {ECO:0000313|Proteomes:UP000001973};
RN   [1] {ECO:0000313|EMBL:CAC40609.1, ECO:0000313|Proteomes:UP000001973}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=A3 {ECO:0000313|EMBL:CAC40609.1}, and ATCC BAA-471 / A3(2) /
RC   M145 {ECO:0000313|Proteomes:UP000001973};
RX   PubMed=12000953; DOI=10.1038/417141a;
RA   Bentley S.D., Chater K.F., Cerdeno-Tarraga A.M., Challis G.L.,
RA   Thomson N.R., James K.D., Harris D.E., Quail M.A., Kieser H., Harper D.,
RA   Bateman A., Brown S., Chandra G., Chen C.W., Collins M., Cronin A.,
RA   Fraser A., Goble A., Hidalgo J., Hornsby T., Howarth S., Huang C.H.,
RA   Kieser T., Larke L., Murphy L., Oliver K., O'Neil S., Rabbinowitsch E.,
RA   Rajandream M.A., Rutherford K., Rutter S., Seeger K., Saunders D.,
RA   Sharp S., Squares R., Squares S., Taylor K., Warren T., Wietzorrek A.,
RA   Woodward J., Barrell B.G., Parkhill J., Hopwood D.A.;
RT   "Complete genome sequence of the model actinomycete Streptomyces coelicolor
RT   A3(2).";
RL   Nature 417:141-147(2002).
RN   [2] {ECO:0000313|EMBL:TYP03716.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=ICSSB 1010 {ECO:0000313|EMBL:TYP03716.1};
RA   Yuzawa S.;
RT   "Genome sequencing of Streptomyces strains engineered using actinophage
RT   integration system.";
RL   Submitted (JUL-2019) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC       {ECO:0000256|SAAS:SAAS01160068}.
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DR   EMBL; AL939122; CAC40609.1; -; Genomic_DNA.
DR   EMBL; VNID01000027; TYP03716.1; -; Genomic_DNA.
DR   RefSeq; NP_629148.1; NC_003888.3.
DR   RefSeq; WP_003973981.1; NC_003888.3.
DR   STRING; 100226.SCO4996; -.
DR   EnsemblBacteria; CAC40609; CAC40609; CAC40609.
DR   GeneID; 1100437; -.
DR   KEGG; sco:SCO4996; -.
DR   PATRIC; fig|100226.15.peg.5077; -.
DR   eggNOG; ENOG410YKYX; LUCA.
DR   HOGENOM; HOG000094755; -.
DR   InParanoid; Q93JJ8; -.
DR   OMA; SRMYVLW; -.
DR   PhylomeDB; Q93JJ8; -.
DR   Proteomes; UP000001973; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR039425; RNA_pol_sigma-70-like.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR014325; RNA_pol_sigma-E_actinobac.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   PANTHER; PTHR43133; PTHR43133; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF08281; Sigma70_r4_2; 1.
DR   SUPFAM; SSF88659; SSF88659; 1.
DR   SUPFAM; SSF88946; SSF88946; 1.
DR   TIGRFAMs; TIGR02983; SigE-fam_strep; 1.
DR   TIGRFAMs; TIGR02937; sigma70-ECF; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q93JJ8.
DR   SWISS-2DPAGE; Q93JJ8.
KW   DNA-binding {ECO:0000256|SAAS:SAAS00611263};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001973};
KW   Sigma factor {ECO:0000256|SAAS:SAAS00611278};
KW   Transcription {ECO:0000256|SAAS:SAAS00611290};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00611294}.
FT   DOMAIN          22..80
FT                   /note="Sigma70_r2"
FT                   /evidence="ECO:0000259|Pfam:PF04542"
FT   DOMAIN          103..155
FT                   /note="Sigma70_r4_2"
FT                   /evidence="ECO:0000259|Pfam:PF08281"
SQ   SEQUENCE   169 AA;  18703 MW;  A61B1442F33790C5 CRC64;
     MRQGRADEYA EFAVARAGHL YRSACLLTAG DTHLAEDLVQ ETFGRLYVRW GRVSRAENPA
     AYAQTVLTRA FLAHQRRRSS GERATDVFPD LPGAGDGDAS LRLTLLDALA RLPAKDRAVV
     VLRYWDDRSV EQTADVLGVS SAAVRTRCSR ALGRLRELLG EDLSEYARP
//

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