(data stored in ACNUC1104 zone)

SWISSPROT: Q7TT87_BORPA

ID   Q7TT87_BORPA            Unreviewed;       316 AA.
AC   Q7TT87;
DT   01-OCT-2003, integrated into UniProtKB/TrEMBL.
DT   01-OCT-2003, sequence version 1.
DT   11-DEC-2019, entry version 90.
DE   SubName: Full=Transposase for IS1002 {ECO:0000313|EMBL:CAE36911.1};
GN   OrderedLocusNames=BPP0908 {ECO:0000313|EMBL:CAE40316.1}, BPP1610
GN   {ECO:0000313|EMBL:CAE36911.1}, BPP2064 {ECO:0000313|EMBL:CAE37364.1},
GN   BPP2353 {ECO:0000313|EMBL:CAE37650.1};
OS   Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Alcaligenaceae; Bordetella.
OX   NCBI_TaxID=257311 {ECO:0000313|Proteomes:UP000001421};
RN   [1] {ECO:0000313|EMBL:CAE36911.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=12822 {ECO:0000313|EMBL:CAE36911.1};
RA   Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N., Harris D.E.,
RA   Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L.,
RA   Cerdeno-Tarraga A.M., Temple L., James K., Harris B., Quail M.A.,
RA   Achtman M., Atkin R., Baker S., Basham D., Bason N., Cherevach I.,
RA   Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T.,
RA   Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S.,
RA   Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E.,
RA   Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M.,
RA   Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S.,
RA   Barrell B.G., Maskell D.J.;
RT   "Comparative analysis of the genome sequences of Bordetella pertussis,
RT   Bordetella parapertussis and Bordetella bronchiseptica.";
RL   Nat. Genet. 35:0-0(2003).
RN   [2] {ECO:0000313|Proteomes:UP000001421}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=12822 / ATCC BAA-587 / NCTC 13253
RC   {ECO:0000313|Proteomes:UP000001421};
RX   PubMed=12910271; DOI=10.1038/ng1227;
RA   Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N., Harris D.E.,
RA   Holden M.T., Churcher C.M., Bentley S.D., Mungall K.L.,
RA   Cerdeno-Tarraga A.M., Temple L., James K., Harris B., Quail M.A.,
RA   Achtman M., Atkin R., Baker S., Basham D., Bason N., Cherevach I.,
RA   Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T.,
RA   Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S.,
RA   Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E.,
RA   Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M.,
RA   Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S.,
RA   Barrell B.G., Maskell D.J.;
RT   "Comparative analysis of the genome sequences of Bordetella pertussis,
RT   Bordetella parapertussis and Bordetella bronchiseptica.";
RL   Nat. Genet. 35:32-40(2003).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; BX640427; CAE36911.1; -; Genomic_DNA.
DR   EMBL; BX640429; CAE37364.1; -; Genomic_DNA.
DR   EMBL; BX640430; CAE37650.1; -; Genomic_DNA.
DR   EMBL; BX640425; CAE40316.1; -; Genomic_DNA.
DR   RefSeq; WP_010927744.1; NC_002928.3.
DR   EnsemblBacteria; CAE36911; CAE36911; BPP1610.
DR   EnsemblBacteria; CAE37364; CAE37364; BPP2064.
DR   EnsemblBacteria; CAE37650; CAE37650; BPP2353.
DR   EnsemblBacteria; CAE40316; CAE40316; BPP0908.
DR   KEGG; bpa:BPP0908; -.
DR   KEGG; bpa:BPP1610; -.
DR   KEGG; bpa:BPP2064; -.
DR   KEGG; bpa:BPP2353; -.
DR   HOGENOM; HOG000104361; -.
DR   OMA; NLAGHHI; -.
DR   BioCyc; BPAR257311:G1GSY-1650-MONOMER; -.
DR   BioCyc; BPAR257311:G1GSY-2135-MONOMER; -.
DR   BioCyc; BPAR257311:G1GSY-2436-MONOMER; -.
DR   BioCyc; BPAR257311:G1GSY-933-MONOMER; -.
DR   Proteomes; UP000001421; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   GO; GO:0032196; P:transposition; IEA:InterPro.
DR   Gene3D; 3.30.420.10; -; 1.
DR   InterPro; IPR024967; DNA-bd_IS481-type.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR038965; InsF-like.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   PANTHER; PTHR42648; PTHR42648; 1.
DR   Pfam; PF13011; LZ_Tnp_IS481; 1.
DR   Pfam; PF00665; rve; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   SUPFAM; SSF53098; SSF53098; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
PE   4: Predicted;
FT   DOMAIN          128..308
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
DR   PRODOM; Q7TT87.
DR   SWISS-2DPAGE; Q7TT87.
SQ   SEQUENCE   316 AA;  36151 MW;  FD51AB442A3DFCAF CRC64;
     MNNHKHARLT RLGRALLVNR VMQQNWTMRQ ASQAAGVSLR TGYKWLARFR SEGLDGLLDR
     SSRPHRSPKA CAPEQVEHFA QQRRQRLPLW RIAREAGRSL ATVARYMERI GLSRLASLEP
     PAPVRRYERA SPGELLHIDT KRLGRIRGVG HRITGDRAQN RNRGIGWDAV HLAIDDFSRV
     SFARILDDEG GDQCAEFLRQ ATAYYASLGV RIDRVMTDNG SGYVSRTFRA VCVELGIRHI
     RTRPYTPKTN GKAERLVQTC LREWAYARPY TSSAERQAAL QPFIDRYNWC RPHSALGHQP
     PITRIPDVNN LLRIDT
//

If you have problems or comments...

PBIL Back to PBIL home page