(data stored in ACNUC6288 zone)

SWISSPROT: SLX9_DEBHA

ID   SLX9_DEBHA              Reviewed;         188 AA.
AC   Q6BMZ5;
DT   20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
DT   16-DEC-2008, sequence version 2.
DT   08-MAY-2019, entry version 61.
DE   RecName: Full=Ribosome biogenesis protein SLX9;
GN   Name=SLX9; OrderedLocusNames=DEHA2F01430g;
OS   Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
OS   0083 / IGC 2968) (Yeast) (Torulaspora hansenii).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
OC   Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Debaryomyces.
OX   NCBI_TaxID=284592;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968;
RX   PubMed=15229592; DOI=10.1038/nature02579;
RA   Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S.,
RA   Lafontaine I., de Montigny J., Marck C., Neuveglise C., Talla E.,
RA   Goffard N., Frangeul L., Aigle M., Anthouard V., Babour A., Barbe V.,
RA   Barnay S., Blanchin S., Beckerich J.-M., Beyne E., Bleykasten C.,
RA   Boisrame A., Boyer J., Cattolico L., Confanioleri F., de Daruvar A.,
RA   Despons L., Fabre E., Fairhead C., Ferry-Dumazet H., Groppi A.,
RA   Hantraye F., Hennequin C., Jauniaux N., Joyet P., Kachouri R.,
RA   Kerrest A., Koszul R., Lemaire M., Lesur I., Ma L., Muller H.,
RA   Nicaud J.-M., Nikolski M., Oztas S., Ozier-Kalogeropoulos O.,
RA   Pellenz S., Potier S., Richard G.-F., Straub M.-L., Suleau A.,
RA   Swennen D., Tekaia F., Wesolowski-Louvel M., Westhof E., Wirth B.,
RA   Zeniou-Meyer M., Zivanovic Y., Bolotin-Fukuhara M., Thierry A.,
RA   Bouchier C., Caudron B., Scarpelli C., Gaillardin C., Weissenbach J.,
RA   Wincker P., Souciet J.-L.;
RT   "Genome evolution in yeasts.";
RL   Nature 430:35-44(2004).
CC   -!- FUNCTION: Involved in ribosome biogenesis. Required for normal
CC       pre-rRNA processing in internal transcribed spacer 1 (ITS1). May
CC       be involved in the movements of the replication forks (By
CC       similarity). {ECO:0000250}.
CC   -!- SUBUNIT: Interacts with the 35S, 23S and 20S pre-rRNAs and with
CC       the U3 snoRNA. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250}.
CC   -!- SIMILARITY: Belongs to the SLX9 family. {ECO:0000305}.
DR   EMBL; CR382138; CAG88732.2; -; Genomic_DNA.
DR   RefSeq; XP_460425.2; XM_460425.2.
DR   STRING; 4959.XP_460425.2; -.
DR   PRIDE; Q6BMZ5; -.
DR   EnsemblFungi; CAG88732; CAG88732; DEHA2F01430g.
DR   GeneID; 2903828; -.
DR   KEGG; dha:DEHA2F01430g; -.
DR   HOGENOM; HOG000065990; -.
DR   InParanoid; Q6BMZ5; -.
DR   KO; K14804; -.
DR   OMA; LKPKMQD; -.
DR   OrthoDB; 1594718at2759; -.
DR   Proteomes; UP000000599; Chromosome F.
DR   GO; GO:0030686; C:90S preribosome; IEA:InterPro.
DR   GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR   GO; GO:0030688; C:preribosome, small subunit precursor; IEA:InterPro.
DR   GO; GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:InterPro.
DR   InterPro; IPR028160; Slx9-like.
DR   Pfam; PF15341; SLX9; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q6BMZ5.
DR   SWISS-2DPAGE; Q6BMZ5.
KW   Complete proteome; Nucleus; Reference proteome; Ribosome biogenesis;
KW   rRNA processing.
FT   CHAIN         1    188       Ribosome biogenesis protein SLX9.
FT                                /FTId=PRO_0000333449.
SQ   SEQUENCE   188 AA;  21162 MW;  094C762075A56437 CRC64;
     MAVKKRTTLR DKHAKSNTKS NLSGKIAELK EENNGQESDY HENPFLKLSK VTKKDKQLNK
     SQNFSQKFDS STLNTSSNIS KSALRRRKRN ARNELKPKMD ELLQNLPETT NVIDPSAAAH
     KPNDHKSTKF IKSTKASANL PNATKQTGHA KIMTQESKNF TNVLKNPQFR SSPFSALKDA
     IAQNIQNQ
//

If you have problems or comments...

PBIL Back to PBIL home page