(data stored in SCRATCH zone)

SWISSPROT: YBEY_CHLAB

ID   YBEY_CHLAB              Reviewed;         158 AA.
AC   Q5L6N4;
DT   17-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT   21-JUN-2005, sequence version 1.
DT   11-DEC-2019, entry version 76.
DE   RecName: Full=Endoribonuclease YbeY {ECO:0000255|HAMAP-Rule:MF_00009};
DE            EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00009};
GN   Name=ybeY {ECO:0000255|HAMAP-Rule:MF_00009}; OrderedLocusNames=CAB231;
OS   Chlamydia abortus (strain DSM 27085 / S26/3) (Chlamydophila abortus).
OC   Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae;
OC   Chlamydia/Chlamydophila group; Chlamydia.
OX   NCBI_TaxID=218497;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 27085 / S26/3;
RX   PubMed=15837807; DOI=10.1101/gr.3684805;
RA   Thomson N.R., Yeats C., Bell K., Holden M.T.G., Bentley S.D.,
RA   Livingstone M., Cerdeno-Tarraga A.-M., Harris B., Doggett J., Ormond D.,
RA   Mungall K., Clarke K., Feltwell T., Hance Z., Sanders M., Quail M.A.,
RA   Price C., Barrell B.G., Parkhill J., Longbottom D.;
RT   "The Chlamydophila abortus genome sequence reveals an array of variable
RT   proteins that contribute to interspecies variation.";
RL   Genome Res. 15:629-640(2005).
CC   -!- FUNCTION: Single strand-specific metallo-endoribonuclease involved in
CC       late-stage 70S ribosome quality control and in maturation of the 3'
CC       terminus of the 16S rRNA. {ECO:0000255|HAMAP-Rule:MF_00009}.
CC   -!- COFACTOR:
CC       Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC         Evidence={ECO:0000255|HAMAP-Rule:MF_00009};
CC       Note=Binds 1 zinc ion. {ECO:0000255|HAMAP-Rule:MF_00009};
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00009}.
CC   -!- SIMILARITY: Belongs to the endoribonuclease YbeY family.
CC       {ECO:0000255|HAMAP-Rule:MF_00009}.
DR   EMBL; CR848038; CAH63687.1; -; Genomic_DNA.
DR   RefSeq; WP_011096918.1; NC_004552.2.
DR   SMR; Q5L6N4; -.
DR   STRING; 218497.CAB231; -.
DR   PRIDE; Q5L6N4; -.
DR   EnsemblBacteria; CAH63687; CAH63687; CAB231.
DR   KEGG; cab:CAB231; -.
DR   eggNOG; ENOG4107Z9E; Bacteria.
DR   eggNOG; COG0319; LUCA.
DR   HOGENOM; HOG000110624; -.
DR   KO; K07042; -.
DR   OMA; MRVKENQ; -.
DR   OrthoDB; 1830156at2; -.
DR   BioCyc; CABO218497:G1GI1-251-MONOMER; -.
DR   Proteomes; UP000001012; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0004521; F:endoribonuclease activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0004222; F:metalloendopeptidase activity; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.40.390.30; -; 1.
DR   HAMAP; MF_00009; Endoribonucl_YbeY; 1.
DR   InterPro; IPR023091; MetalPrtase_cat_dom_sf_prd.
DR   InterPro; IPR002036; YbeY.
DR   Pfam; PF02130; UPF0054; 1.
DR   TIGRFAMs; TIGR00043; TIGR00043; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q5L6N4.
DR   SWISS-2DPAGE; Q5L6N4.
KW   Cytoplasm; Endonuclease; Hydrolase; Metal-binding; Nuclease;
KW   Ribosome biogenesis; rRNA processing; Zinc.
FT   CHAIN           1..158
FT                   /note="Endoribonuclease YbeY"
FT                   /id="PRO_0000284183"
FT   METAL           119
FT                   /note="Zinc; catalytic"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_00009"
FT   METAL           123
FT                   /note="Zinc; catalytic"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_00009"
FT   METAL           129
FT                   /note="Zinc; catalytic"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_00009"
SQ   SEQUENCE   158 AA;  18087 MW;  8B4A0521BA6A84EC CRC64;
     MKKVPLQVCV SNKQCDVPIR IQSVKKLVLC CLQCWKVSTD QVYVYFLDDE ALAQLHDEVF
     ADPSLTDTIT LPIDSPESTA HPHILGEAFI SPKAAIRFLQ DRAEDTDLLY EEISRYVVHS
     LLHMLGYDDQ TPEERKKMRG KENQALCMLR EKHALLSD
//

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