(data stored in ACNUC7421 zone)

SWISSPROT: Q3IDE1_PSEHT

ID   Q3IDE1_PSEHT            Unreviewed;       481 AA.
AC   Q3IDE1;
DT   08-NOV-2005, integrated into UniProtKB/TrEMBL.
DT   08-NOV-2005, sequence version 1.
DT   07-JUN-2017, entry version 82.
DE   SubName: Full=Putative transcriptional regulator YdcR (GntR family) {ECO:0000313|EMBL:CAI85168.1};
GN   OrderedLocusNames=PSHAa0059 {ECO:0000313|EMBL:CAI85168.1};
OS   Pseudoalteromonas haloplanktis (strain TAC 125).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Pseudoalteromonadaceae; Pseudoalteromonas.
OX   NCBI_TaxID=326442 {ECO:0000313|EMBL:CAI85168.1, ECO:0000313|Proteomes:UP000006843};
RN   [1] {ECO:0000313|EMBL:CAI85168.1, ECO:0000313|Proteomes:UP000006843}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=TAC 125 {ECO:0000313|Proteomes:UP000006843};
RX   PubMed=16169927; DOI=10.1101/gr.4126905;
RA   Medigue C., Krin E., Pascal G., Barbe V., Bernsel A., Bertin P.,
RA   Cheung F., Cruveiller S., Damico S., Duilio A., Fang G., Feller G.,
RA   Mangenot S., Marino G., Nilsson J., Parilli E., Rocha E., Rouy Z.,
RA   Sekowska A., Tutino M.L., Vallenet D., von Heijne G., Danchin A.;
RT   "Coping with cold: the genome of the versatile marine Antarctica
RT   bacterium Pseudoalteromonas haloplanktis TAC125.";
RL   Genome Res. 15:1325-1335(2005).
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DR   EMBL; CR954246; CAI85168.1; -; Genomic_DNA.
DR   ProteinModelPortal; Q3IDE1; -.
DR   STRING; 326442.PSHAa0059; -.
DR   EnsemblBacteria; CAI85168; CAI85168; PSHAa0059.
DR   KEGG; pha:PSHAa0059; -.
DR   eggNOG; ENOG4105C1I; Bacteria.
DR   eggNOG; COG1167; LUCA.
DR   HOGENOM; HOG000133006; -.
DR   OMA; MRLNFTY; -.
DR   OrthoDB; POG091H0268; -.
DR   BioCyc; PHAL326442:GJIU-61-MONOMER; -.
DR   Proteomes; UP000006843; Chromosome I.
DR   GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   CDD; cd07377; WHTH_GntR; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   Gene3D; 3.40.640.10; -; 1.
DR   Gene3D; 3.90.1150.10; -; 1.
DR   InterPro; IPR004839; Aminotransferase_I/II.
DR   InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR   InterPro; IPR015421; PyrdxlP-dep_Trfase_major_sub1.
DR   InterPro; IPR015422; PyrdxlP-dep_Trfase_sub2.
DR   InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF00155; Aminotran_1_2; 1.
DR   Pfam; PF00392; GntR; 1.
DR   SMART; SM00345; HTH_GNTR; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   SUPFAM; SSF53383; SSF53383; 1.
DR   PROSITE; PS50949; HTH_GNTR; 1.
PE   4: Predicted;
DR   PRODOM; Q3IDE1.
DR   SWISS-2DPAGE; Q3IDE1.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006843};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00307,
KW   ECO:0000256|SAAS:SAAS00145206};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006843};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00307,
KW   ECO:0000256|SAAS:SAAS00145490};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00307,
KW   ECO:0000256|SAAS:SAAS00145675}.
FT   DOMAIN       12     80       HTH gntR-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS50949}.
FT   DNA_BIND     40     59       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00307}.
SQ   SEQUENCE   481 AA;  53197 MW;  BD1F68DD3A502002 CRC64;
     MILKAVSHQG HEFLYQQVIQ LIRDMSAQQA LLPSEKLPSL RKMASNLNIS IPTVKQAYQA
     LEDQGVIEAR EKSGYFLKAV NMASSLPKRV KLSREPVIVN KQALIEQVYT AIHQAHVVPF
     GVANPVAAAP TDKALARNMR RVMTLAGSSA INYGPLDGYA PLKKQLIHRY LNFGIGINMD
     EMVITNGAQE ALAIALKCVT KPGDVVAIES PCYHGIIELI ESLGLKALEI PLCPDNGIWL
     NDLAQALNEH DIKACLFSTA ISNPVGSFMP DKNREQLVEL VESHNVVLIE DDVYGDLYFT
     PKRGTPAIAY SKKGLVLSCS SFSKTAAPSY RVGWLIAGKF AGQARRYKRA LSCSTSLINQ
     WTLSEFVFSG EYDRNLKVLR QRLRTNKEHM RRCLQQAMPK GTRISDPQGG CVIWLDLGCE
     YDSQKLFSLA LEVGISITPG LIFSASNKYK SCIRLSYGVQ WSEQIEQAIV TLGKLTLLAK
     K
//

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