(data stored in ACNUC7421 zone)

SWISSPROT: Q3IEH3_PSEHT

ID   Q3IEH3_PSEHT            Unreviewed;       310 AA.
AC   Q3IEH3;
DT   08-NOV-2005, integrated into UniProtKB/TrEMBL.
DT   08-NOV-2005, sequence version 1.
DT   07-JUN-2017, entry version 78.
DE   SubName: Full=Putative transcriptional activator for lysine biosynthesis (LysR family) {ECO:0000313|EMBL:CAI85525.1};
GN   OrderedLocusNames=PSHAa0427 {ECO:0000313|EMBL:CAI85525.1};
OS   Pseudoalteromonas haloplanktis (strain TAC 125).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Pseudoalteromonadaceae; Pseudoalteromonas.
OX   NCBI_TaxID=326442 {ECO:0000313|EMBL:CAI85525.1, ECO:0000313|Proteomes:UP000006843};
RN   [1] {ECO:0000313|EMBL:CAI85525.1, ECO:0000313|Proteomes:UP000006843}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=TAC 125 {ECO:0000313|Proteomes:UP000006843};
RX   PubMed=16169927; DOI=10.1101/gr.4126905;
RA   Medigue C., Krin E., Pascal G., Barbe V., Bernsel A., Bertin P.,
RA   Cheung F., Cruveiller S., Damico S., Duilio A., Fang G., Feller G.,
RA   Mangenot S., Marino G., Nilsson J., Parilli E., Rocha E., Rouy Z.,
RA   Sekowska A., Tutino M.L., Vallenet D., von Heijne G., Danchin A.;
RT   "Coping with cold: the genome of the versatile marine Antarctica
RT   bacterium Pseudoalteromonas haloplanktis TAC125.";
RL   Genome Res. 15:1325-1335(2005).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CR954246; CAI85525.1; -; Genomic_DNA.
DR   RefSeq; WP_011327138.1; NC_007481.1.
DR   ProteinModelPortal; Q3IEH3; -.
DR   STRING; 326442.PSHAa0427; -.
DR   EnsemblBacteria; CAI85525; CAI85525; PSHAa0427.
DR   KEGG; pha:PSHAa0427; -.
DR   PATRIC; fig|326442.8.peg.407; -.
DR   eggNOG; ENOG4105RQF; Bacteria.
DR   eggNOG; ENOG410XT7K; LUCA.
DR   HOGENOM; HOG000233527; -.
DR   OMA; VTVHWIG; -.
DR   OrthoDB; POG091H0I44; -.
DR   BioCyc; PHAL326442:GJIU-433-MONOMER; -.
DR   Proteomes; UP000006843; Chromosome I.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   PRINTS; PR00039; HTHLYSR.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   4: Predicted;
DR   PRODOM; Q3IEH3.
DR   SWISS-2DPAGE; Q3IEH3.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006843};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661574};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006843};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661597};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661673}.
FT   DOMAIN        8     65       HTH lysR-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS50931}.
FT   DNA_BIND     25     44       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00253}.
SQ   SEQUENCE   310 AA;  34201 MW;  6CE69A367B2F1E60 CRC64;
     MQQNQQKITL NSLEAFDAVI KTGSATGAAK LLGLTQPGIS RLIAQLESKV GFSLFYREKA
     RLFPTDEAVA LHKQVETSLA SVYRVEQLAK NIHQSHVGHL NIVAPSSFVA GPLAEAVASF
     LKDHPNVKIN LDSHSPARAC ELVANKAFDC GFIQLPENHD NLLCEPIISS NLVCAVSSSH
     PFASARELQP EDLRDESLVL LGQGRHSRRR IEHAFLQSNV RLKVRVETHT VPTACTLAKH
     GVGISIVNKL IAQQFQNDDL KLIPFKPEIE IVYGFITSTS APMNRLTQTF YNHCKVHFSQ
     FMDSCGLSEK
//

If you have problems or comments...

PBIL Back to PBIL home page