(data stored in ACNUC7421 zone)

SWISSPROT: Q3IFS9_PSEHT

ID   Q3IFS9_PSEHT            Unreviewed;       337 AA.
AC   Q3IFS9;
DT   08-NOV-2005, integrated into UniProtKB/TrEMBL.
DT   08-NOV-2005, sequence version 1.
DT   07-JUN-2017, entry version 85.
DE   SubName: Full=Putative transcriptional regulator, AraC family {ECO:0000313|EMBL:CAI85533.1};
GN   OrderedLocusNames=PSHAa0435 {ECO:0000313|EMBL:CAI85533.1};
OS   Pseudoalteromonas haloplanktis (strain TAC 125).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Pseudoalteromonadaceae; Pseudoalteromonas.
OX   NCBI_TaxID=326442 {ECO:0000313|EMBL:CAI85533.1, ECO:0000313|Proteomes:UP000006843};
RN   [1] {ECO:0000313|EMBL:CAI85533.1, ECO:0000313|Proteomes:UP000006843}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=TAC 125 {ECO:0000313|Proteomes:UP000006843};
RX   PubMed=16169927; DOI=10.1101/gr.4126905;
RA   Medigue C., Krin E., Pascal G., Barbe V., Bernsel A., Bertin P.,
RA   Cheung F., Cruveiller S., Damico S., Duilio A., Fang G., Feller G.,
RA   Mangenot S., Marino G., Nilsson J., Parilli E., Rocha E., Rouy Z.,
RA   Sekowska A., Tutino M.L., Vallenet D., von Heijne G., Danchin A.;
RT   "Coping with cold: the genome of the versatile marine Antarctica
RT   bacterium Pseudoalteromonas haloplanktis TAC125.";
RL   Genome Res. 15:1325-1335(2005).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CR954246; CAI85533.1; -; Genomic_DNA.
DR   RefSeq; WP_011327146.1; NC_007481.1.
DR   ProteinModelPortal; Q3IFS9; -.
DR   STRING; 326442.PSHAa0435; -.
DR   EnsemblBacteria; CAI85533; CAI85533; PSHAa0435.
DR   KEGG; pha:PSHAa0435; -.
DR   PATRIC; fig|326442.8.peg.413; -.
DR   eggNOG; ENOG4108WHX; Bacteria.
DR   eggNOG; ENOG4111KU9; LUCA.
DR   HOGENOM; HOG000292443; -.
DR   OMA; QYWVHLG; -.
DR   OrthoDB; POG091H039B; -.
DR   BioCyc; PHAL326442:GJIU-441-MONOMER; -.
DR   Proteomes; UP000006843; Chromosome I.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   InterPro; IPR032687; AraC-type_N.
DR   InterPro; IPR009057; Homeobox-like.
DR   InterPro; IPR018060; HTH_AraC.
DR   Pfam; PF12625; Arabinose_bd; 1.
DR   Pfam; PF12833; HTH_18; 1.
DR   SMART; SM00342; HTH_ARAC; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE   4: Predicted;
DR   PRODOM; Q3IFS9.
DR   SWISS-2DPAGE; Q3IFS9.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006843};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00593,
KW   ECO:0000256|SAAS:SAAS00048696};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006843};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00593};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00593}.
FT   DOMAIN      234    333       HTH araC/xylS-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS01124}.
FT   DNA_BIND    253    274       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00593}.
FT   DNA_BIND    300    323       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00593}.
SQ   SEQUENCE   337 AA;  39432 MW;  659CC74AEEE0D9F7 CRC64;
     MVRPYVTLND KFIPVQGLVA CLLELAQQRQ LNQHKLLRGT GIFDEDLLRP DFYLSLSQLL
     RLLKQFNNLM PGRDAAFQLG HRLFPASSAE ASAILHSRNL TQALRLLSCF RLQLAPLLFA
     HHYKYNDYSY LQLNDAVGLD EQQYQFVVEL YCCLLVSASR YMLGERIPFH FEFPFQRPRH
     IYEYEEHLGL KLTFGRPSLI VKFAQKWLTS PLLRSSQLHR KLAMQQVNRD MLKQTFIEMI
     SNYLHHHRQA NLQQVSEHLN MSTATLKRRL KEHNLRFSQL QDRINMQLAF HFLTVQGLSN
     EVVAEKLAFH DAPNFRRACK RWTGLTPTEL KALALSK
//

If you have problems or comments...

PBIL Back to PBIL home page