(data stored in ACNUC9435 zone)

SWISSPROT: RL6_CLOD6

ID   RL6_CLOD6               Reviewed;         180 AA.
AC   Q18CH5;
DT   12-DEC-2006, integrated into UniProtKB/Swiss-Prot.
DT   25-JUL-2006, sequence version 1.
DT   11-DEC-2019, entry version 74.
DE   RecName: Full=50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365};
GN   Name=rplF {ECO:0000255|HAMAP-Rule:MF_01365}; OrderedLocusNames=CD630_00860;
OS   Clostridioides difficile (strain 630) (Peptoclostridium difficile).
OC   Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae;
OC   Clostridioides.
OX   NCBI_TaxID=272563;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=630;
RX   PubMed=16804543; DOI=10.1038/ng1830;
RA   Sebaihia M., Wren B.W., Mullany P., Fairweather N.F., Minton N.,
RA   Stabler R., Thomson N.R., Roberts A.P., Cerdeno-Tarraga A.M., Wang H.,
RA   Holden M.T.G., Wright A., Churcher C., Quail M.A., Baker S., Bason N.,
RA   Brooks K., Chillingworth T., Cronin A., Davis P., Dowd L., Fraser A.,
RA   Feltwell T., Hance Z., Holroyd S., Jagels K., Moule S., Mungall K.,
RA   Price C., Rabbinowitsch E., Sharp S., Simmonds M., Stevens K., Unwin L.,
RA   Whithead S., Dupuy B., Dougan G., Barrell B., Parkhill J.;
RT   "The multidrug-resistant human pathogen Clostridium difficile has a highly
RT   mobile, mosaic genome.";
RL   Nat. Genet. 38:779-786(2006).
CC   -!- FUNCTION: This protein binds to the 23S rRNA, and is important in its
CC       secondary structure. It is located near the subunit interface in the
CC       base of the L7/L12 stalk, and near the tRNA binding site of the
CC       peptidyltransferase center. {ECO:0000255|HAMAP-Rule:MF_01365}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000255|HAMAP-
CC       Rule:MF_01365}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL6 family.
CC       {ECO:0000255|HAMAP-Rule:MF_01365}.
DR   EMBL; AM180355; CAJ66903.1; -; Genomic_DNA.
DR   RefSeq; WP_003435668.1; NZ_CP010905.2.
DR   RefSeq; YP_001086552.1; NC_009089.1.
DR   SMR; Q18CH5; -.
DR   STRING; 272563.CD630_00860; -.
DR   EnsemblBacteria; CAJ66903; CAJ66903; CD630_00860.
DR   GeneID; 4916507; -.
DR   KEGG; cdf:CD630_00860; -.
DR   KEGG; pdc:CDIF630_00154; -.
DR   PATRIC; fig|272563.120.peg.94; -.
DR   eggNOG; ENOG4108R5J; Bacteria.
DR   eggNOG; COG0097; LUCA.
DR   HOGENOM; HOG000039903; -.
DR   KO; K02933; -.
DR   OMA; INNMVVG; -.
DR   Proteomes; UP000001978; Chromosome.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.90.930.12; -; 2.
DR   HAMAP; MF_01365_B; Ribosomal_L6_B; 1.
DR   InterPro; IPR000702; Ribosomal_L6.
DR   InterPro; IPR020040; Ribosomal_L6_a/b-dom.
DR   InterPro; IPR036789; Ribosomal_L6_a/b-dom_sf.
DR   InterPro; IPR019906; Ribosomal_L6_bac-type.
DR   InterPro; IPR002358; Ribosomal_L6_CS.
DR   PANTHER; PTHR11655; PTHR11655; 1.
DR   PANTHER; PTHR11655:SF14; PTHR11655:SF14; 1.
DR   Pfam; PF00347; Ribosomal_L6; 2.
DR   PIRSF; PIRSF002162; Ribosomal_L6; 1.
DR   PRINTS; PR00059; RIBOSOMALL6.
DR   SUPFAM; SSF56053; SSF56053; 2.
DR   TIGRFAMs; TIGR03654; L6_bact; 1.
DR   PROSITE; PS00525; RIBOSOMAL_L6_1; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q18CH5.
DR   SWISS-2DPAGE; Q18CH5.
KW   Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW   rRNA-binding.
FT   CHAIN           1..180
FT                   /note="50S ribosomal protein L6"
FT                   /id="PRO_0000265246"
SQ   SEQUENCE   180 AA;  19966 MW;  2329FD69E15FD932 CRC64;
     MSRIGVKPII IPAGVEVTIA EGNLVTVKGP KGTLTKQLSA ELNIKKEENT IMVERPTDNK
     KHRSLHGLTR TLLDNMVVGV NTGFEKKLEL KGVGYRAQKQ GKKLVMNLGF SHPVEMEDPE
     GITVEAPNQT ELIVKGIDKQ LVGNYAAKIR AWRKPEPYKG KGIKYVDEVI RRKEGKTGKK
//

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