(data stored in ACNUC8465 zone)

SWISSPROT: C5DCT6_LACTC

ID   C5DCT6_LACTC            Unreviewed;       480 AA.
AC   C5DCT6;
DT   28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT   28-JUL-2009, sequence version 1.
DT   11-DEC-2019, entry version 53.
DE   SubName: Full=KLTH0B05698p {ECO:0000313|EMBL:CAR21597.1};
GN   OrderedLocusNames=KLTH0B05698g {ECO:0000313|EMBL:CAR21597.1};
OS   Lachancea thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL Y-8284)
OS   (Yeast) (Kluyveromyces thermotolerans).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC   Saccharomycetales; Saccharomycetaceae; Lachancea.
OX   NCBI_TaxID=559295 {ECO:0000313|EMBL:CAR21597.1, ECO:0000313|Proteomes:UP000002036};
RN   [1] {ECO:0000313|EMBL:CAR21597.1, ECO:0000313|Proteomes:UP000002036}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 56472 / CBS 6340 / NRRL Y-8284
RC   {ECO:0000313|Proteomes:UP000002036};
RX   PubMed=19525356; DOI=10.1101/gr.091546.109;
RG   The Genolevures Consortium;
RA   Souciet J.-L., Dujon B., Gaillardin C., Johnston M., Baret P.V.,
RA   Cliften P., Sherman D.J., Weissenbach J., Westhof E., Wincker P., Jubin C.,
RA   Poulain J., Barbe V., Segurens B., Artiguenave F., Anthouard V.,
RA   Vacherie B., Val M.-E., Fulton R.S., Minx P., Wilson R., Durrens P.,
RA   Jean G., Marck C., Martin T., Nikolski M., Rolland T., Seret M.-L.,
RA   Casaregola S., Despons L., Fairhead C., Fischer G., Lafontaine I., Leh V.,
RA   Lemaire M., de Montigny J., Neuveglise C., Thierry A., Blanc-Lenfle I.,
RA   Bleykasten C., Diffels J., Fritsch E., Frangeul L., Goeffon A.,
RA   Jauniaux N., Kachouri-Lafond R., Payen C., Potier S., Pribylova L.,
RA   Ozanne C., Richard G.-F., Sacerdot C., Straub M.-L., Talla E.;
RT   "Comparative genomics of protoploid Saccharomycetaceae.";
RL   Genome Res. 19:1696-1709(2009).
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DR   EMBL; CU928166; CAR21597.1; -; Genomic_DNA.
DR   RefSeq; XP_002552035.1; XM_002551989.1.
DR   STRING; 381046.XP_002552035.1; -.
DR   EnsemblFungi; CAR21597; CAR21597; KLTH0B05698g.
DR   GeneID; 8290874; -.
DR   KEGG; lth:KLTH0B05698g; -.
DR   HOGENOM; HOG000209594; -.
DR   InParanoid; C5DCT6; -.
DR   OMA; ARQFVIH; -.
DR   OrthoDB; 1507367at2759; -.
DR   Proteomes; UP000002036; Chromosome B.
DR   GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:InterPro.
DR   CDD; cd00165; S4; 1.
DR   Gene3D; 3.10.290.10; -; 1.
DR   InterPro; IPR022801; Ribosomal_S4/S9.
DR   InterPro; IPR005709; Ribosomal_S4_bac-type.
DR   InterPro; IPR018079; Ribosomal_S4_CS.
DR   InterPro; IPR002942; S4_RNA-bd.
DR   InterPro; IPR036986; S4_RNA-bd_sf.
DR   PANTHER; PTHR11831; PTHR11831; 1.
DR   PANTHER; PTHR11831:SF4; PTHR11831:SF4; 1.
DR   Pfam; PF01479; S4; 1.
DR   SMART; SM00363; S4; 1.
DR   PROSITE; PS00632; RIBOSOMAL_S4; 1.
DR   PROSITE; PS50889; S4; 1.
PE   4: Predicted;
DR   PRODOM; C5DCT6.
DR   SWISS-2DPAGE; C5DCT6.
KW   Reference proteome {ECO:0000313|Proteomes:UP000002036};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00182};
KW   rRNA-binding {ECO:0000256|PROSITE-ProRule:PRU00182}.
FT   DOMAIN          103..172
FT                   /note="S4 RNA-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS50889"
SQ   SEQUENCE   480 AA;  54752 MW;  D13D4BEDF4554BD0 CRC64;
     MPRKAVLLKS LARGRIRSSF NKYNLFNLYK KGDVDFRSKT LYQQKWTAKQ ETRAYHGEHM
     TEGRWQTTFT PKLDSVAQLD ASLKGGEIDQ TPILLQTFAV LEKRLDFALF RAMFASSVRQ
     ARQFILHGNV FVNGIKITQP GYPLKAGDVF NVKPEKVLQA LGAKKPSLSE ALKIDKLQIA
     VWNKYVKAIK ENPREEWKRK QEKFRAMDDS NPKKQEYMEF VRNYNKSLTA QMESEIKSAT
     KEAILGKAVL AGSSAADPEN PLVEEFLTHF YDDKALATKA VECFNELRNT KLIQPDAASK
     SVAELTEFAR TLTNLTEELK NSMSDSSKKS LRAAKNIVSE LLTSQDSVIR KLYESKKGSE
     ETLSIPYDPL WAKRIQGHKP IDIKELAEDE SKASQLINLP WQKGLYGRQD PSKPYFTPWK
     PRPFLAPFAI LPHHIEVSFK TCHAVYLRDP VARPGQSEVI SPFGLPVHER AYMYYVRNGK
//

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