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ID D3UY02_XENBS Unreviewed; 177 AA.
AC D3UY02;
DT 20-APR-2010, integrated into UniProtKB/TrEMBL.
DT 20-APR-2010, sequence version 1.
DT 16-JAN-2019, entry version 55.
DE RecName: Full=ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416};
DE AltName: Full=ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416};
DE AltName: Full=F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416};
DE Short=F-ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416};
GN Name=atpH {ECO:0000256|HAMAP-Rule:MF_01416,
GN ECO:0000313|EMBL:CBJ79180.1};
GN OrderedLocusNames=XBJ1_0025 {ECO:0000313|EMBL:CBJ79180.1};
OS Xenorhabdus bovienii (strain SS-2004).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Morganellaceae; Xenorhabdus.
OX NCBI_TaxID=406818 {ECO:0000313|EMBL:CBJ79180.1, ECO:0000313|Proteomes:UP000002045};
RN [1] {ECO:0000313|Proteomes:UP000002045}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SS-2004 {ECO:0000313|Proteomes:UP000002045};
RA Goodrich-Blair H., Barbazuk B., Bode H.B., Darby C., Du Z., Forst S.,
RA Gaudriault S., Goldman B.S., Goodner B., Henkhaus J., Latreille P.,
RA Medigue C., Miller N., Norton S., Ogier J.C., Rouy Z., Slater S.,
RA Suen G.;
RT "Complete genome sequence of Xenorhabdus nematophila (strain ATCC
RT 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6).";
RL Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:CBJ79180.1, ECO:0000313|Proteomes:UP000002045}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SS-2004 {ECO:0000313|EMBL:CBJ79180.1,
RC ECO:0000313|Proteomes:UP000002045};
RX PubMed=22125637; DOI=10.1371/journal.pone.0027909;
RA Chaston J.M., Suen G., Tucker S.L., Andersen A.W., Bhasin A., Bode E.,
RA Bode H.B., Brachmann A.O., Cowles C.E., Cowles K.N., Darby C.,
RA de Leon L., Drace K., Du Z., Givaudan A., Herbert Tran E.E.,
RA Jewell K.A., Knack J.J., Krasomil-Osterfeld K.C., Kukor R., Lanois A.,
RA Latreille P., Leimgruber N.K., Lipke C.M., Liu R., Lu X.,
RA Martens E.C., Marri P.R., Medigue C., Menard M.L., Miller N.M.,
RA Morales-Soto N., Norton S., Ogier J.C., Orchard S.S., Park D.,
RA Park Y., Qurollo B.A., Sugar D.R., Richards G.R., Rouy Z.,
RA Slominski B., Slominski K., Snyder H., Tjaden B.C., van der Hoeven R.,
RA Welch R.D., Wheeler C., Xiang B., Barbazuk B., Gaudriault S.,
RA Goodner B., Slater S.C., Forst S., Goldman B.S., Goodrich-Blair H.;
RT "The entomopathogenic bacterial endosymbionts xenorhabdus and
RT photorhabdus: convergent lifestyles from divergent genomes.";
RL PLoS ONE 6:e27909-e27909(2011).
CC -!- FUNCTION: F(1)F(0) ATP synthase produces ATP from ADP in the
CC presence of a proton or sodium gradient. F-type ATPases consist of
CC two structural domains, F(1) containing the extramembraneous
CC catalytic core and F(0) containing the membrane proton channel,
CC linked together by a central stalk and a peripheral stalk. During
CC catalysis, ATP synthesis in the catalytic domain of F(1) is
CC coupled via a rotary mechanism of the central stalk subunits to
CC proton translocation. {ECO:0000256|HAMAP-Rule:MF_01416}.
CC -!- FUNCTION: This protein is part of the stalk that links CF(0) to
CC CF(1). It either transmits conformational changes from CF(0) to
CC CF(1) or is implicated in proton conduction. {ECO:0000256|HAMAP-
CC Rule:MF_01416}.
CC -!- SUBUNIT: F-type ATPases have 2 components, F(1) - the catalytic
CC core - and F(0) - the membrane proton channel. F(1) has five
CC subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0)
CC has three main subunits: a(1), b(2) and c(10-14). The alpha and
CC beta chains form an alternating ring which encloses part of the
CC gamma chain. F(1) is attached to F(0) by a central stalk formed by
CC the gamma and epsilon chains, while a peripheral stalk is formed
CC by the delta and b chains. {ECO:0000256|HAMAP-Rule:MF_01416}.
CC -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000256|HAMAP-
CC Rule:MF_01416}; Peripheral membrane protein {ECO:0000256|HAMAP-
CC Rule:MF_01416}.
CC -!- SIMILARITY: Belongs to the ATPase delta chain family.
CC {ECO:0000256|HAMAP-Rule:MF_01416, ECO:0000256|SAAS:SAAS01082575}.
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DR EMBL; FN667741; CBJ79180.1; -; Genomic_DNA.
DR RefSeq; WP_012986653.1; NC_013892.1.
DR STRING; 406818.XBJ1_0025; -.
DR EnsemblBacteria; CBJ79180; CBJ79180; XBJ1_0025.
DR GeneID; 8829652; -.
DR KEGG; xbo:XBJ1_0025; -.
DR eggNOG; ENOG4107S15; Bacteria.
DR eggNOG; COG0712; LUCA.
DR HOGENOM; HOG000075824; -.
DR KO; K02113; -.
DR OMA; MVDNIQD; -.
DR BioCyc; XBOV406818:XBJ1_RS00105-MONOMER; -.
DR Proteomes; UP000002045; Chromosome.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0045261; C:proton-transporting ATP synthase complex, catalytic core F(1); IEA:UniProtKB-KW.
DR GO; GO:0046933; F:proton-transporting ATP synthase activity, rotational mechanism; IEA:UniProtKB-UniRule.
DR GO; GO:0015986; P:ATP synthesis coupled proton transport; IEA:UniProtKB-UniRule.
DR Gene3D; 1.10.520.20; -; 1.
DR HAMAP; MF_01416; ATP_synth_delta_bact; 1.
DR InterPro; IPR026015; ATP_synth_OSCP/delta_N_sf.
DR InterPro; IPR020781; ATPase_OSCP/d_CS.
DR InterPro; IPR000711; ATPase_OSCP/dsu.
DR PANTHER; PTHR11910; PTHR11910; 1.
DR Pfam; PF00213; OSCP; 1.
DR PRINTS; PR00125; ATPASEDELTA.
DR SUPFAM; SSF47928; SSF47928; 1.
DR TIGRFAMs; TIGR01145; ATP_synt_delta; 1.
DR PROSITE; PS00389; ATPASE_DELTA; 1.
PE 3: Inferred from homology;
DR PRODOM; D3UY02.
DR SWISS-2DPAGE; D3UY02.
KW ATP synthesis {ECO:0000256|HAMAP-Rule:MF_01416,
KW ECO:0000256|SAAS:SAAS00673570};
KW Cell inner membrane {ECO:0000256|HAMAP-Rule:MF_01416};
KW Cell membrane {ECO:0000256|HAMAP-Rule:MF_01416};
KW CF(1) {ECO:0000256|HAMAP-Rule:MF_01416};
KW Complete proteome {ECO:0000313|Proteomes:UP000002045};
KW Hydrogen ion transport {ECO:0000256|HAMAP-Rule:MF_01416,
KW ECO:0000256|SAAS:SAAS00673590};
KW Hydrolase {ECO:0000313|EMBL:CBJ79180.1};
KW Ion transport {ECO:0000256|HAMAP-Rule:MF_01416,
KW ECO:0000256|SAAS:SAAS00673577};
KW Membrane {ECO:0000256|HAMAP-Rule:MF_01416,
KW ECO:0000256|SAAS:SAAS00673593};
KW Reference proteome {ECO:0000313|Proteomes:UP000002045};
KW Transport {ECO:0000256|HAMAP-Rule:MF_01416,
KW ECO:0000256|SAAS:SAAS00673594}.
SQ SEQUENCE 177 AA; 19648 MW; A6AFCF46A6DB42AB CRC64;
MSEFATVARP YAKAAFDFAV EHQSLEHWQN MLAFVAEVTR NEQVGELLSG SLAPETLANT
FITLCGEQVD EHAQNFIRVM AENGRLLVLP EVFQQFTQLR ASLESTINVE VISASELNEQ
QQAKISAAME KRLSRKVKLN CKIDKSVIAG VVIRAGDMVI DGSIRGRLDR LTDVLQS
//
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