(data stored in ACNUC1104 zone)

SWISSPROT: D3UYD0_XENBS

ID   D3UYD0_XENBS            Unreviewed;       299 AA.
AC   D3UYD0;
DT   20-APR-2010, integrated into UniProtKB/TrEMBL.
DT   20-APR-2010, sequence version 1.
DT   08-MAY-2019, entry version 56.
DE   SubName: Full=Putative LysR-family transcriptional regulator {ECO:0000313|EMBL:CBJ79308.1};
GN   OrderedLocusNames=XBJ1_0157 {ECO:0000313|EMBL:CBJ79308.1};
OS   Xenorhabdus bovienii (strain SS-2004).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Morganellaceae; Xenorhabdus.
OX   NCBI_TaxID=406818 {ECO:0000313|EMBL:CBJ79308.1, ECO:0000313|Proteomes:UP000002045};
RN   [1] {ECO:0000313|Proteomes:UP000002045}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=SS-2004 {ECO:0000313|Proteomes:UP000002045};
RA   Goodrich-Blair H., Barbazuk B., Bode H.B., Darby C., Du Z., Forst S.,
RA   Gaudriault S., Goldman B.S., Goodner B., Henkhaus J., Latreille P.,
RA   Medigue C., Miller N., Norton S., Ogier J.C., Rouy Z., Slater S.,
RA   Suen G.;
RT   "Complete genome sequence of Xenorhabdus nematophila (strain ATCC
RT   19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6).";
RL   Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:CBJ79308.1, ECO:0000313|Proteomes:UP000002045}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=SS-2004 {ECO:0000313|EMBL:CBJ79308.1,
RC   ECO:0000313|Proteomes:UP000002045};
RX   PubMed=22125637; DOI=10.1371/journal.pone.0027909;
RA   Chaston J.M., Suen G., Tucker S.L., Andersen A.W., Bhasin A., Bode E.,
RA   Bode H.B., Brachmann A.O., Cowles C.E., Cowles K.N., Darby C.,
RA   de Leon L., Drace K., Du Z., Givaudan A., Herbert Tran E.E.,
RA   Jewell K.A., Knack J.J., Krasomil-Osterfeld K.C., Kukor R., Lanois A.,
RA   Latreille P., Leimgruber N.K., Lipke C.M., Liu R., Lu X.,
RA   Martens E.C., Marri P.R., Medigue C., Menard M.L., Miller N.M.,
RA   Morales-Soto N., Norton S., Ogier J.C., Orchard S.S., Park D.,
RA   Park Y., Qurollo B.A., Sugar D.R., Richards G.R., Rouy Z.,
RA   Slominski B., Slominski K., Snyder H., Tjaden B.C., van der Hoeven R.,
RA   Welch R.D., Wheeler C., Xiang B., Barbazuk B., Gaudriault S.,
RA   Goodner B., Slater S.C., Forst S., Goldman B.S., Goodrich-Blair H.;
RT   "The entomopathogenic bacterial endosymbionts xenorhabdus and
RT   photorhabdus: convergent lifestyles from divergent genomes.";
RL   PLoS ONE 6:e27909-e27909(2011).
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|SAAS:SAAS01096700}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; FN667741; CBJ79308.1; -; Genomic_DNA.
DR   RefSeq; WP_012986775.1; NC_013892.1.
DR   STRING; 406818.XBJ1_0157; -.
DR   EnsemblBacteria; CBJ79308; CBJ79308; XBJ1_0157.
DR   GeneID; 8829781; -.
DR   KEGG; xbo:XBJ1_0157; -.
DR   PATRIC; fig|406818.4.peg.146; -.
DR   eggNOG; ENOG4108WET; Bacteria.
DR   eggNOG; ENOG4111FFK; LUCA.
DR   HOGENOM; HOG000233522; -.
DR   OMA; DFEWYRS; -.
DR   BioCyc; XBOV406818:XBJ1_RS00700-MONOMER; -.
DR   Proteomes; UP000002045; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   PRINTS; PR00039; HTHLYSR.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
DR   PRODOM; D3UYD0.
DR   SWISS-2DPAGE; D3UYD0.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002045};
KW   DNA-binding {ECO:0000256|SAAS:SAAS01096662};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002045};
KW   Transcription {ECO:0000256|SAAS:SAAS01096725};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS01096646}.
FT   DOMAIN        1     59       HTH lysR-type. {ECO:0000259|PROSITE:
FT                                PS50931}.
SQ   SEQUENCE   299 AA;  33533 MW;  52A9DBA48CF8FDEE CRC64;
     MSYLIQLRSF LDVYRSGSIS KAATRLGVSQ PAVSAHVHSL ESFMGSVLFT RRSHGVIPTA
     EADDLVLQIG THLDAIETKL SLIRGKSKKI EGVVKIIAPA DFLWAKSANI LSSIINKQLR
     FKLLIGDRKK IYSSLNDGDS DLAFTTSCPD ENKFGFEIIG KEKLIIVTSA SIAAELKNKS
     ISPEILEKYP LISYDNQLPL IRDYYKLVFG VEADILPSIT ISDLRVIGRI ISDNNGWTVM
     PEYLCEDGFK SRKVFKINHN TNIPENNFYL VWNKSALRHP RVLYVKNHII NLAQQGYFG
//

If you have problems or comments...

PBIL Back to PBIL home page