(data stored in ACNUC1104 zone)

SWISSPROT: D3VA56_XENNA

ID   D3VA56_XENNA            Unreviewed;       346 AA.
AC   D3VA56;
DT   20-APR-2010, integrated into UniProtKB/TrEMBL.
DT   20-APR-2010, sequence version 1.
DT   11-DEC-2019, entry version 55.
DE   SubName: Full=Transposase {ECO:0000313|EMBL:CBJ91620.1};
GN   OrderedLocusNames=XNC1_0016 {ECO:0000313|EMBL:CBJ88109.1}, XNC1_0201
GN   {ECO:0000313|EMBL:CBJ88289.1}, XNC1_2381
GN   {ECO:0000313|EMBL:CBJ90440.1}, XNC1_2644
GN   {ECO:0000313|EMBL:CBJ90698.1}, XNC1_2646
GN   {ECO:0000313|EMBL:CBJ90700.1}, XNC1_3588
GN   {ECO:0000313|EMBL:CBJ91620.1}, XNC1_3827
GN   {ECO:0000313|EMBL:CBJ91858.1}, XNC1_4204
GN   {ECO:0000313|EMBL:CBJ92229.1}, XNC1_4635
GN   {ECO:0000313|EMBL:CBJ92657.1};
GN   ORFNames=XNC1_p0015 {ECO:0000313|EMBL:CBJ92883.1}, XNC1_p0151
GN   {ECO:0000313|EMBL:CBJ93019.1};
OS   Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB
OS   9965 / AN6).
OG   Plasmid XNC1_p {ECO:0000313|EMBL:CBJ92883.1,
OG   ECO:0000313|Proteomes:UP000008075}.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Morganellaceae; Xenorhabdus.
OX   NCBI_TaxID=406817 {ECO:0000313|EMBL:CBJ91620.1, ECO:0000313|Proteomes:UP000008075};
RN   [1] {ECO:0000313|Proteomes:UP000008075}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6
RC   {ECO:0000313|Proteomes:UP000008075};
RA   Goodrich-Blair H., Barbazuk B., Bode H.B., Darby C., Du Z., Forst S.,
RA   Gaudriault S., Goldman B.S., Goodner B., Henkhaus J., Latreille P.,
RA   Medigue C., Miller N., Norton S., Ogier J.C., Rouy Z., Slater S., Suen G.;
RT   "Complete genome sequence of Xenorhabdus nematophila (strain ATCC 19061 /
RT   DSM 3370 / LMG 1036 / NCIB 9965 / AN6).";
RL   Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:CBJ91620.1, ECO:0000313|Proteomes:UP000008075}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 19061 {ECO:0000313|EMBL:CBJ91620.1}, and ATCC 19061 / DSM
RC   3370 / LMG 1036 / NCIB 9965 / AN6 {ECO:0000313|Proteomes:UP000008075};
RC   PLASMID=XNC1_p {ECO:0000313|EMBL:CBJ92883.1,
RC   ECO:0000313|Proteomes:UP000008075};
RX   PubMed=22125637; DOI=10.1371/journal.pone.0027909;
RA   Chaston J.M., Suen G., Tucker S.L., Andersen A.W., Bhasin A., Bode E.,
RA   Bode H.B., Brachmann A.O., Cowles C.E., Cowles K.N., Darby C., de Leon L.,
RA   Drace K., Du Z., Givaudan A., Herbert Tran E.E., Jewell K.A., Knack J.J.,
RA   Krasomil-Osterfeld K.C., Kukor R., Lanois A., Latreille P.,
RA   Leimgruber N.K., Lipke C.M., Liu R., Lu X., Martens E.C., Marri P.R.,
RA   Medigue C., Menard M.L., Miller N.M., Morales-Soto N., Norton S.,
RA   Ogier J.C., Orchard S.S., Park D., Park Y., Qurollo B.A., Sugar D.R.,
RA   Richards G.R., Rouy Z., Slominski B., Slominski K., Snyder H., Tjaden B.C.,
RA   van der Hoeven R., Welch R.D., Wheeler C., Xiang B., Barbazuk B.,
RA   Gaudriault S., Goodner B., Slater S.C., Forst S., Goldman B.S.,
RA   Goodrich-Blair H.;
RT   "The entomopathogenic bacterial endosymbionts xenorhabdus and photorhabdus:
RT   convergent lifestyles from divergent genomes.";
RL   PLoS ONE 6:e27909-e27909(2011).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; FN667742; CBJ88109.1; -; Genomic_DNA.
DR   EMBL; FN667742; CBJ88289.1; -; Genomic_DNA.
DR   EMBL; FN667742; CBJ90440.1; -; Genomic_DNA.
DR   EMBL; FN667742; CBJ90698.1; -; Genomic_DNA.
DR   EMBL; FN667742; CBJ90700.1; -; Genomic_DNA.
DR   EMBL; FN667742; CBJ91620.1; -; Genomic_DNA.
DR   EMBL; FN667742; CBJ91858.1; -; Genomic_DNA.
DR   EMBL; FN667742; CBJ92229.1; -; Genomic_DNA.
DR   EMBL; FN667742; CBJ92657.1; -; Genomic_DNA.
DR   EMBL; FN667743; CBJ92883.1; -; Genomic_DNA.
DR   EMBL; FN667743; CBJ93019.1; -; Genomic_DNA.
DR   RefSeq; WP_013141539.1; NC_014228.1.
DR   STRING; 406817.XNC1_p0151; -.
DR   EnsemblBacteria; CBJ88109; CBJ88109; XNC1_0016.
DR   EnsemblBacteria; CBJ88289; CBJ88289; XNC1_0201.
DR   EnsemblBacteria; CBJ90440; CBJ90440; XNC1_2381.
DR   EnsemblBacteria; CBJ90698; CBJ90698; XNC1_2644.
DR   EnsemblBacteria; CBJ90700; CBJ90700; XNC1_2646.
DR   EnsemblBacteria; CBJ91620; CBJ91620; XNC1_3588.
DR   EnsemblBacteria; CBJ91858; CBJ91858; XNC1_3827.
DR   EnsemblBacteria; CBJ92229; CBJ92229; XNC1_4204.
DR   EnsemblBacteria; CBJ92657; CBJ92657; XNC1_4635.
DR   EnsemblBacteria; CBJ92883; CBJ92883; XNC1_p0015.
DR   EnsemblBacteria; CBJ93019; CBJ93019; XNC1_p0151.
DR   KEGG; xne:XNC1_0016; -.
DR   KEGG; xne:XNC1_0201; -.
DR   KEGG; xne:XNC1_2381; -.
DR   KEGG; xne:XNC1_2644; -.
DR   KEGG; xne:XNC1_2646; -.
DR   KEGG; xne:XNC1_3588; -.
DR   KEGG; xne:XNC1_3827; -.
DR   KEGG; xne:XNC1_4204; -.
DR   KEGG; xne:XNC1_4635; -.
DR   KEGG; xne:XNC1_p0015; -.
DR   KEGG; xne:XNC1_p0151; -.
DR   eggNOG; ENOG4107MUM; Bacteria.
DR   eggNOG; ENOG410XQAB; LUCA.
DR   HOGENOM; HOG000227863; -.
DR   OMA; RFHRTIL; -.
DR   BioCyc; XNEM406817:GHY4-16-MONOMER; -.
DR   Proteomes; UP000008075; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   GO; GO:0032196; P:transposition; IEA:InterPro.
DR   Gene3D; 3.30.420.10; -; 1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR038965; InsF-like.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   PANTHER; PTHR42648; PTHR42648; 1.
DR   Pfam; PF00665; rve; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   SUPFAM; SSF53098; SSF53098; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
PE   4: Predicted;
DR   PRODOM; D3VA56.
DR   SWISS-2DPAGE; D3VA56.
KW   Coiled coil {ECO:0000256|SAM:Coils}; Plasmid {ECO:0000313|EMBL:CBJ92883.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008075}.
FT   DOMAIN          159..335
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
FT   COILED          290..317
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   346 AA;  39449 MW;  4048D885958D2004 CRC64;
     MLYTSNPIIK HKAGLLNLAE ELSNVSRACK VMGVSRDTFY RYQELVETGG IDALINQSRK
     TPNLKNRVDA ETEHAVINSA IEFPAYGQAR TSNELRKAGI FVSASGVRSI WLRHHLENFK
     KRLAALEKKV ADEGIILTDE QVAALERKQH DDEACGEIET AHPGYLGSQD TFYVGNLKGV
     GRLYQQTFVD TYSKVAFAKL YTSKTPITAA DLLNDRVLPF FSAHRLPMLR ILTDRGTEYC
     GRVEHHDYQL YLAVNDIDHT RTKAMSPQTN GICERFHKTI LNEFYQVTFR KKLYGSLDEL
     QKDLDKWMDN YNNHRTHQGK MCCGRTPIET LQDGKSIWAE KNLTQI
//

If you have problems or comments...

PBIL Back to PBIL home page