(data stored in ACNUC1104 zone)

SWISSPROT: D3VHS6_XENNA

ID   D3VHS6_XENNA            Unreviewed;       177 AA.
AC   D3VHS6;
DT   20-APR-2010, integrated into UniProtKB/TrEMBL.
DT   20-APR-2010, sequence version 1.
DT   16-JAN-2019, entry version 49.
DE   RecName: Full=50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870};
GN   Name=rplF {ECO:0000256|HAMAP-Rule:MF_01365,
GN   ECO:0000313|EMBL:CBJ88415.1};
GN   OrderedLocusNames=XNC1_0333 {ECO:0000313|EMBL:CBJ88415.1};
OS   Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 /
OS   NCIB 9965 / AN6).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Morganellaceae; Xenorhabdus.
OX   NCBI_TaxID=406817 {ECO:0000313|EMBL:CBJ88415.1, ECO:0000313|Proteomes:UP000008075};
RN   [1] {ECO:0000313|Proteomes:UP000008075}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6
RC   {ECO:0000313|Proteomes:UP000008075};
RA   Goodrich-Blair H., Barbazuk B., Bode H.B., Darby C., Du Z., Forst S.,
RA   Gaudriault S., Goldman B.S., Goodner B., Henkhaus J., Latreille P.,
RA   Medigue C., Miller N., Norton S., Ogier J.C., Rouy Z., Slater S.,
RA   Suen G.;
RT   "Complete genome sequence of Xenorhabdus nematophila (strain ATCC
RT   19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6).";
RL   Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:CBJ88415.1, ECO:0000313|Proteomes:UP000008075}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6
RC   {ECO:0000313|Proteomes:UP000008075};
RX   PubMed=22125637; DOI=10.1371/journal.pone.0027909;
RA   Chaston J.M., Suen G., Tucker S.L., Andersen A.W., Bhasin A., Bode E.,
RA   Bode H.B., Brachmann A.O., Cowles C.E., Cowles K.N., Darby C.,
RA   de Leon L., Drace K., Du Z., Givaudan A., Herbert Tran E.E.,
RA   Jewell K.A., Knack J.J., Krasomil-Osterfeld K.C., Kukor R., Lanois A.,
RA   Latreille P., Leimgruber N.K., Lipke C.M., Liu R., Lu X.,
RA   Martens E.C., Marri P.R., Medigue C., Menard M.L., Miller N.M.,
RA   Morales-Soto N., Norton S., Ogier J.C., Orchard S.S., Park D.,
RA   Park Y., Qurollo B.A., Sugar D.R., Richards G.R., Rouy Z.,
RA   Slominski B., Slominski K., Snyder H., Tjaden B.C., van der Hoeven R.,
RA   Welch R.D., Wheeler C., Xiang B., Barbazuk B., Gaudriault S.,
RA   Goodner B., Slater S.C., Forst S., Goldman B.S., Goodrich-Blair H.;
RT   "The entomopathogenic bacterial endosymbionts xenorhabdus and
RT   photorhabdus: convergent lifestyles from divergent genomes.";
RL   PLoS ONE 6:e27909-e27909(2011).
CC   -!- FUNCTION: This protein binds to the 23S rRNA, and is important in
CC       its secondary structure. It is located near the subunit interface
CC       in the base of the L7/L12 stalk, and near the tRNA binding site of
CC       the peptidyltransferase center. {ECO:0000256|HAMAP-Rule:MF_01365,
CC       ECO:0000256|RuleBase:RU003870}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000256|HAMAP-
CC       Rule:MF_01365}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL6 family.
CC       {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003869}.
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DR   EMBL; FN667742; CBJ88415.1; -; Genomic_DNA.
DR   RefSeq; WP_010847491.1; NC_014228.1.
DR   STRING; 406817.XNC1_0333; -.
DR   EnsemblBacteria; CBJ88415; CBJ88415; XNC1_0333.
DR   KEGG; xne:XNC1_0333; -.
DR   eggNOG; ENOG4108R5J; Bacteria.
DR   eggNOG; COG0097; LUCA.
DR   HOGENOM; HOG000039903; -.
DR   KO; K02933; -.
DR   OMA; INNMVVG; -.
DR   Proteomes; UP000008075; Chromosome.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.90.930.12; -; 2.
DR   HAMAP; MF_01365_B; Ribosomal_L6_B; 1.
DR   InterPro; IPR000702; Ribosomal_L6.
DR   InterPro; IPR020040; Ribosomal_L6_a/b-dom.
DR   InterPro; IPR036789; Ribosomal_L6_a/b-dom_sf.
DR   InterPro; IPR019906; Ribosomal_L6_bac-type.
DR   InterPro; IPR002358; Ribosomal_L6_CS.
DR   PANTHER; PTHR11655; PTHR11655; 1.
DR   PANTHER; PTHR11655:SF14; PTHR11655:SF14; 1.
DR   Pfam; PF00347; Ribosomal_L6; 2.
DR   PIRSF; PIRSF002162; Ribosomal_L6; 1.
DR   PRINTS; PR00059; RIBOSOMALL6.
DR   SUPFAM; SSF56053; SSF56053; 2.
DR   TIGRFAMs; TIGR03654; L6_bact; 1.
DR   PROSITE; PS00525; RIBOSOMAL_L6_1; 1.
PE   3: Inferred from homology;
DR   PRODOM; D3VHS6.
DR   SWISS-2DPAGE; D3VHS6.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008075};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008075};
KW   Ribonucleoprotein {ECO:0000256|HAMAP-Rule:MF_01365,
KW   ECO:0000256|RuleBase:RU003869};
KW   Ribosomal protein {ECO:0000256|HAMAP-Rule:MF_01365,
KW   ECO:0000256|RuleBase:RU003869};
KW   RNA-binding {ECO:0000256|HAMAP-Rule:MF_01365,
KW   ECO:0000256|RuleBase:RU003870};
KW   rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01365,
KW   ECO:0000256|RuleBase:RU003870}.
FT   DOMAIN       11     82       Ribosomal_L6. {ECO:0000259|Pfam:PF00347}.
FT   DOMAIN       90    164       Ribosomal_L6. {ECO:0000259|Pfam:PF00347}.
SQ   SEQUENCE   177 AA;  18954 MW;  87AA7D4885CD46DC CRC64;
     MSRVAKAPVV IPAGVEVKLN GQVISIKGKN GELSREIHNA VEVTHADNQL TFAPREGFAD
     AWAQAGTTRS LLNAMVIGVN EGFTKKLQLV GVGYRAAVKG NAVSLSLGFS HPVEHQLPAG
     ITAECPSQTE IVLKGADKQV IGQVAADLRA YRRPEPYKGK GVRYADEVVR TKEAKKK
//

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