(data stored in ACNUC1104 zone)

SWISSPROT: D3VHT5_XENNA

ID   D3VHT5_XENNA            Unreviewed;       206 AA.
AC   D3VHT5;
DT   20-APR-2010, integrated into UniProtKB/TrEMBL.
DT   20-APR-2010, sequence version 1.
DT   16-JAN-2019, entry version 52.
DE   RecName: Full=30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306};
GN   Name=rpsD {ECO:0000256|HAMAP-Rule:MF_01306,
GN   ECO:0000313|EMBL:CBJ88424.1};
GN   OrderedLocusNames=XNC1_0342 {ECO:0000313|EMBL:CBJ88424.1};
OS   Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 /
OS   NCIB 9965 / AN6).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Morganellaceae; Xenorhabdus.
OX   NCBI_TaxID=406817 {ECO:0000313|EMBL:CBJ88424.1, ECO:0000313|Proteomes:UP000008075};
RN   [1] {ECO:0000313|Proteomes:UP000008075}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6
RC   {ECO:0000313|Proteomes:UP000008075};
RA   Goodrich-Blair H., Barbazuk B., Bode H.B., Darby C., Du Z., Forst S.,
RA   Gaudriault S., Goldman B.S., Goodner B., Henkhaus J., Latreille P.,
RA   Medigue C., Miller N., Norton S., Ogier J.C., Rouy Z., Slater S.,
RA   Suen G.;
RT   "Complete genome sequence of Xenorhabdus nematophila (strain ATCC
RT   19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6).";
RL   Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:CBJ88424.1, ECO:0000313|Proteomes:UP000008075}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6
RC   {ECO:0000313|Proteomes:UP000008075};
RX   PubMed=22125637; DOI=10.1371/journal.pone.0027909;
RA   Chaston J.M., Suen G., Tucker S.L., Andersen A.W., Bhasin A., Bode E.,
RA   Bode H.B., Brachmann A.O., Cowles C.E., Cowles K.N., Darby C.,
RA   de Leon L., Drace K., Du Z., Givaudan A., Herbert Tran E.E.,
RA   Jewell K.A., Knack J.J., Krasomil-Osterfeld K.C., Kukor R., Lanois A.,
RA   Latreille P., Leimgruber N.K., Lipke C.M., Liu R., Lu X.,
RA   Martens E.C., Marri P.R., Medigue C., Menard M.L., Miller N.M.,
RA   Morales-Soto N., Norton S., Ogier J.C., Orchard S.S., Park D.,
RA   Park Y., Qurollo B.A., Sugar D.R., Richards G.R., Rouy Z.,
RA   Slominski B., Slominski K., Snyder H., Tjaden B.C., van der Hoeven R.,
RA   Welch R.D., Wheeler C., Xiang B., Barbazuk B., Gaudriault S.,
RA   Goodner B., Slater S.C., Forst S., Goldman B.S., Goodrich-Blair H.;
RT   "The entomopathogenic bacterial endosymbionts xenorhabdus and
RT   photorhabdus: convergent lifestyles from divergent genomes.";
RL   PLoS ONE 6:e27909-e27909(2011).
CC   -!- FUNCTION: One of the primary rRNA binding proteins, it binds
CC       directly to 16S rRNA where it nucleates assembly of the body of
CC       the 30S subunit. {ECO:0000256|HAMAP-Rule:MF_01306}.
CC   -!- FUNCTION: With S5 and S12 plays an important role in translational
CC       accuracy. {ECO:0000256|HAMAP-Rule:MF_01306}.
CC   -!- SUBUNIT: Part of the 30S ribosomal subunit. Contacts protein S5.
CC       The interaction surface between S4 and S5 is involved in control
CC       of translational fidelity. {ECO:0000256|HAMAP-Rule:MF_01306}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uS4 family.
CC       {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|RuleBase:RU003699}.
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DR   EMBL; FN667742; CBJ88424.1; -; Genomic_DNA.
DR   RefSeq; WP_013183231.1; NC_014228.1.
DR   STRING; 406817.XNC1_0342; -.
DR   EnsemblBacteria; CBJ88424; CBJ88424; XNC1_0342.
DR   KEGG; xne:XNC1_0342; -.
DR   eggNOG; ENOG4105G6W; Bacteria.
DR   eggNOG; COG0522; LUCA.
DR   HOGENOM; HOG000221003; -.
DR   KO; K02986; -.
DR   OMA; NVVFRMG; -.
DR   Proteomes; UP000008075; Chromosome.
DR   GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   CDD; cd00165; S4; 1.
DR   Gene3D; 3.10.290.10; -; 1.
DR   HAMAP; MF_01306_B; Ribosomal_S4_B; 1.
DR   InterPro; IPR022801; Ribosomal_S4/S9.
DR   InterPro; IPR001912; Ribosomal_S4/S9_N.
DR   InterPro; IPR005709; Ribosomal_S4_bac-type.
DR   InterPro; IPR018079; Ribosomal_S4_CS.
DR   InterPro; IPR002942; S4_RNA-bd.
DR   InterPro; IPR036986; S4_RNA-bd_sf.
DR   PANTHER; PTHR11831; PTHR11831; 1.
DR   PANTHER; PTHR11831:SF4; PTHR11831:SF4; 1.
DR   Pfam; PF00163; Ribosomal_S4; 1.
DR   Pfam; PF01479; S4; 1.
DR   SMART; SM01390; Ribosomal_S4; 1.
DR   SMART; SM00363; S4; 1.
DR   TIGRFAMs; TIGR01017; rpsD_bact; 1.
DR   PROSITE; PS00632; RIBOSOMAL_S4; 1.
DR   PROSITE; PS50889; S4; 1.
PE   3: Inferred from homology;
DR   PRODOM; D3VHT5.
DR   SWISS-2DPAGE; D3VHT5.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008075};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008075};
KW   Ribonucleoprotein {ECO:0000256|HAMAP-Rule:MF_01306,
KW   ECO:0000256|RuleBase:RU003699};
KW   Ribosomal protein {ECO:0000256|HAMAP-Rule:MF_01306,
KW   ECO:0000256|RuleBase:RU003699};
KW   RNA-binding {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|PROSITE-
KW   ProRule:PRU00182};
KW   rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|PROSITE-
KW   ProRule:PRU00182}.
FT   DOMAIN       96    156       S4 RNA-binding. {ECO:0000259|PROSITE:
FT                                PS50889}.
SQ   SEQUENCE   206 AA;  23571 MW;  D541B2E10F2E8A48 CRC64;
     MARYLGPKLK LSRREGTDLF LKSGVRAIDT KCKLEQAPGQ HGARKPRLSD YGVQLREKQK
     VRRIYGVLER QFRNYYKEAT RLKGNTGENL LNLLESRLDN VVYRMGFGAT RAESRQMVSH
     KAITVNGRVV NIASYQVSPN DVVSVREKAK KQARIKAALE LAEQREKPTW LEVDAAKMEG
     VFKRIPERTD LSADINEHLI VELYSK
//

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