(data stored in ACNUC1104 zone)

SWISSPROT: D3VHU5_XENNA

ID   D3VHU5_XENNA            Unreviewed;       186 AA.
AC   D3VHU5;
DT   20-APR-2010, integrated into UniProtKB/TrEMBL.
DT   20-APR-2010, sequence version 1.
DT   08-MAY-2019, entry version 44.
DE   SubName: Full=Putative DNA topoisomerase {ECO:0000313|EMBL:CBJ88434.1};
GN   Name=yrdD {ECO:0000313|EMBL:CBJ88434.1};
GN   OrderedLocusNames=XNC1_0352 {ECO:0000313|EMBL:CBJ88434.1};
OS   Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 /
OS   NCIB 9965 / AN6).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Morganellaceae; Xenorhabdus.
OX   NCBI_TaxID=406817 {ECO:0000313|EMBL:CBJ88434.1, ECO:0000313|Proteomes:UP000008075};
RN   [1] {ECO:0000313|Proteomes:UP000008075}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6
RC   {ECO:0000313|Proteomes:UP000008075};
RA   Goodrich-Blair H., Barbazuk B., Bode H.B., Darby C., Du Z., Forst S.,
RA   Gaudriault S., Goldman B.S., Goodner B., Henkhaus J., Latreille P.,
RA   Medigue C., Miller N., Norton S., Ogier J.C., Rouy Z., Slater S.,
RA   Suen G.;
RT   "Complete genome sequence of Xenorhabdus nematophila (strain ATCC
RT   19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6).";
RL   Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:CBJ88434.1, ECO:0000313|Proteomes:UP000008075}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6
RC   {ECO:0000313|Proteomes:UP000008075};
RX   PubMed=22125637; DOI=10.1371/journal.pone.0027909;
RA   Chaston J.M., Suen G., Tucker S.L., Andersen A.W., Bhasin A., Bode E.,
RA   Bode H.B., Brachmann A.O., Cowles C.E., Cowles K.N., Darby C.,
RA   de Leon L., Drace K., Du Z., Givaudan A., Herbert Tran E.E.,
RA   Jewell K.A., Knack J.J., Krasomil-Osterfeld K.C., Kukor R., Lanois A.,
RA   Latreille P., Leimgruber N.K., Lipke C.M., Liu R., Lu X.,
RA   Martens E.C., Marri P.R., Medigue C., Menard M.L., Miller N.M.,
RA   Morales-Soto N., Norton S., Ogier J.C., Orchard S.S., Park D.,
RA   Park Y., Qurollo B.A., Sugar D.R., Richards G.R., Rouy Z.,
RA   Slominski B., Slominski K., Snyder H., Tjaden B.C., van der Hoeven R.,
RA   Welch R.D., Wheeler C., Xiang B., Barbazuk B., Gaudriault S.,
RA   Goodner B., Slater S.C., Forst S., Goldman B.S., Goodrich-Blair H.;
RT   "The entomopathogenic bacterial endosymbionts xenorhabdus and
RT   photorhabdus: convergent lifestyles from divergent genomes.";
RL   PLoS ONE 6:e27909-e27909(2011).
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DR   EMBL; FN667742; CBJ88434.1; -; Genomic_DNA.
DR   RefSeq; WP_010847509.1; NC_014228.1.
DR   STRING; 406817.XNC1_0352; -.
DR   EnsemblBacteria; CBJ88434; CBJ88434; XNC1_0352.
DR   KEGG; xne:XNC1_0352; -.
DR   eggNOG; ENOG4108WI1; Bacteria.
DR   eggNOG; COG0551; LUCA.
DR   HOGENOM; HOG000270078; -.
DR   KO; K07479; -.
DR   OMA; HYPECDY; -.
DR   Proteomes; UP000008075; Chromosome.
DR   GO; GO:0005694; C:chromosome; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003917; F:DNA topoisomerase type I activity; IEA:InterPro.
DR   GO; GO:0006265; P:DNA topological change; IEA:InterPro.
DR   InterPro; IPR000380; Topo_IA.
DR   InterPro; IPR013498; Topo_IA_Znf.
DR   PANTHER; PTHR42785; PTHR42785; 3.
DR   Pfam; PF01396; zf-C4_Topoisom; 3.
PE   4: Predicted;
DR   PRODOM; D3VHU5.
DR   SWISS-2DPAGE; D3VHU5.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008075};
KW   Isomerase {ECO:0000313|EMBL:CBJ88434.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008075}.
FT   DOMAIN       13     48       zf-C4_Topoisom. {ECO:0000259|Pfam:
FT                                PF01396}.
FT   DOMAIN       62     98       zf-C4_Topoisom. {ECO:0000259|Pfam:
FT                                PF01396}.
FT   DOMAIN      105    142       zf-C4_Topoisom. {ECO:0000259|Pfam:
FT                                PF01396}.
SQ   SEQUENCE   186 AA;  21165 MW;  8571C516E6C53643 CRC64;
     MSKKVPFAIK KTEYCPECGS KLVIRNGTYG SFYACSSYPS CHYLRSLKVQ IDGHVVKELD
     GQICPRCGLT LVLRQGRYGM FISCSQYPEC GHTELIDKPD DTSISCPQCQ QGKLLQRKSR
     FGKIFHSCSR YPECQFALNN KPISGECMFC HYPLLIEKRT SQGIKLFCAS KLCSKQQFNE
     IENKNE
//

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