(data stored in SCRATCH zone)

SWISSPROT: D1CEI5_THET1

ID   D1CEI5_THET1            Unreviewed;       313 AA.
AC   D1CEI5;
DT   19-JAN-2010, integrated into UniProtKB/TrEMBL.
DT   19-JAN-2010, sequence version 1.
DT   16-JAN-2019, entry version 62.
DE   SubName: Full=Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACZ41341.1};
GN   OrderedLocusNames=Tter_0420 {ECO:0000313|EMBL:ACZ41341.1};
OS   Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).
OC   Bacteria; Thermobaculum.
OX   NCBI_TaxID=525904 {ECO:0000313|EMBL:ACZ41341.1, ECO:0000313|Proteomes:UP000000323};
RN   [1] {ECO:0000313|EMBL:ACZ41341.1, ECO:0000313|Proteomes:UP000000323}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-798 / YNP1 {ECO:0000313|Proteomes:UP000000323};
RX   PubMed=21304745;
RA   Kiss H., Cleland D., Lapidus A., Lucas S., Del Rio T.G., Nolan M.,
RA   Tice H., Han C., Goodwin L., Pitluck S., Liolios K., Ivanova N.,
RA   Mavromatis K., Ovchinnikova G., Pati A., Chen A., Palaniappan K.,
RA   Land M., Hauser L., Chang Y.J., Jeffries C.D., Lu M., Brettin T.,
RA   Detter J.C., Goker M., Tindall B.J., Beck B., McDermott T.R.,
RA   Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA   Kyrpides N.C., Klenk H.P., Cheng J.F.;
RT   "Complete genome sequence of 'Thermobaculum terrenum' type strain
RT   (YNP1).";
RL   Stand. Genomic Sci. 3:153-162(2010).
RN   [2] {ECO:0000313|Proteomes:UP000000323}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-798 / YNP1 {ECO:0000313|Proteomes:UP000000323};
RX   DOI=10.4056/sigs.1153107;
RA   Kiss H., Cleland D., Lapidus A., Lucas S., Glavina Del Rio T.,
RA   Nolan M., Tice H., Han C., Goodwin L., Pitluck S., Liolios K.,
RA   Ivanova N., Mavromatis K., Ovchinnikova G., Pati A., Chen A.,
RA   Palaniappan K., Land M., Hauser L., Chang Y., Jeffries C., Lu M.,
RA   Brettin T., Detter J., Goker M., Tindall B., Beck B., McDermott T.,
RA   Woyke T., Bristow J., Eisen J., Markowitz V., Hugenholtz P.,
RA   Kyrpides N., Klenk H., Cheng J.;
RT   "Complete genome sequence of Thermobaculum terrenum type strain
RT   (YNP1T).";
RL   Stand. Genomic Sci. 3:153-162(2010).
CC   -!- SUBCELLULAR LOCATION: Cell membrane
CC       {ECO:0000256|RuleBase:RU363032}; Multi-pass membrane protein
CC       {ECO:0000256|RuleBase:RU363032}.
CC   -!- SIMILARITY: Belongs to the binding-protein-dependent transport
CC       system permease family. {ECO:0000256|RuleBase:RU363032,
CC       ECO:0000256|SAAS:SAAS00723689}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001825; ACZ41341.1; -; Genomic_DNA.
DR   RefSeq; WP_012874376.1; NC_013525.1.
DR   STRING; 525904.Tter_0420; -.
DR   EnsemblBacteria; ACZ41341; ACZ41341; Tter_0420.
DR   KEGG; ttr:Tter_0420; -.
DR   eggNOG; ENOG4105C2T; Bacteria.
DR   eggNOG; COG1173; LUCA.
DR   HOGENOM; HOG000171367; -.
DR   KO; K15582; -.
DR   OMA; PTGIWWT; -.
DR   OrthoDB; 1734230at2; -.
DR   BioCyc; TTER525904:G1GGS-424-MONOMER; -.
DR   Proteomes; UP000000323; Chromosome 1.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0055085; P:transmembrane transport; IEA:InterPro.
DR   CDD; cd06261; TM_PBP2; 1.
DR   Gene3D; 1.10.3720.10; -; 1.
DR   InterPro; IPR000515; MetI-like.
DR   InterPro; IPR035906; MetI-like_sf.
DR   InterPro; IPR025966; OppC_N.
DR   Pfam; PF00528; BPD_transp_1; 1.
DR   Pfam; PF12911; OppC_N; 1.
DR   SUPFAM; SSF161098; SSF161098; 1.
DR   PROSITE; PS50928; ABC_TM1; 1.
PE   3: Inferred from homology;
DR   PRODOM; D1CEI5.
DR   SWISS-2DPAGE; D1CEI5.
KW   Cell membrane {ECO:0000256|SAAS:SAAS00723714};
KW   Complete proteome {ECO:0000313|Proteomes:UP000000323};
KW   Membrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819239};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000323};
KW   Transmembrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819262};
KW   Transmembrane helix {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819286};
KW   Transport {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00723738}.
FT   TRANSMEM     36     57       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    105    126       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    138    158       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    170    193       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    224    246       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    281    303       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   DOMAIN      103    300       ABC transmembrane type-1.
FT                                {ECO:0000259|PROSITE:PS50928}.
SQ   SEQUENCE   313 AA;  34187 MW;  9A3C8F9E072EA736 CRC64;
     MAEAADQITA LREASAVRPR GLWVDAWRRL KRNKMAIAGA IYILIMALIA IFADVLAPHN
     PNAIDPTAAP NTPPFWVAGH NPQYLLGTDS LARDELSRLI YGARVSLIVG FVPVFIVTAI
     GVTVGMTSGW LGGRADNIIM RIVDVVYAFP ALLFYIVVQS AFRDSKIGDI FGGLLLLFIA
     FAITDWVSMA RLVRGEVLRL KNREFVEAAK ALGVPTRRIL IRHILPNSLA PIIVSIAFGV
     PSYILAESSL SYLGLGVKPQ TPTWGSMVYD SFPQVTYAPE FVLMPSILIA LIMLAFTFLG
     DGLRDALDPY MGK
//

If you have problems or comments...

PBIL Back to PBIL home page