(data stored in SCRATCH zone)

SWISSPROT: D1YUG1_METPS

ID   D1YUG1_METPS            Unreviewed;       220 AA.
AC   D1YUG1;
DT   09-FEB-2010, integrated into UniProtKB/TrEMBL.
DT   09-FEB-2010, sequence version 1.
DT   11-DEC-2019, entry version 41.
DE   RecName: Full=Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032};
DE            Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};
GN   Name=aif6 {ECO:0000313|EMBL:BAI60083.1};
GN   Synonyms=eif6 {ECO:0000256|HAMAP-Rule:MF_00032};
GN   OrderedLocusNames=MCP_0011 {ECO:0000313|EMBL:BAI60083.1};
OS   Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /
OS   SANAE).
OC   Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC   Methanocellales; Methanocellaceae; Methanocella.
OX   NCBI_TaxID=304371 {ECO:0000313|EMBL:BAI60083.1, ECO:0000313|Proteomes:UP000001882};
RN   [1] {ECO:0000313|Proteomes:UP000001882}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 17711 / JCM 13418 / NBRC 101707 / SANAE
RC   {ECO:0000313|Proteomes:UP000001882};
RX   PubMed=21829548; DOI=10.1371/journal.pone.0022898;
RA   Sakai S., Takaki Y., Shimamura S., Sekine M., Tajima T., Kosugi H.,
RA   Ichikawa N., Tasumi E., Hiraki A.T., Shimizu A., Kato Y., Nishiko R.,
RA   Mori K., Fujita N., Imachi H., Takai K.;
RT   "Genome sequence of a mesophilic hydrogenotrophic methanogen Methanocella
RT   paludicola, the first cultivated representative of the order
RT   Methanocellales.";
RL   PLoS ONE 6:E22898-E22898(2011).
CC   -!- FUNCTION: Binds to the 50S ribosomal subunit and prevents its
CC       association with the 30S ribosomal subunit to form the 70S initiation
CC       complex. {ECO:0000256|HAMAP-Rule:MF_00032}.
CC   -!- SIMILARITY: Belongs to the eIF-6 family. {ECO:0000256|HAMAP-
CC       Rule:MF_00032}.
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DR   EMBL; AP011532; BAI60083.1; -; Genomic_DNA.
DR   STRING; 304371.MCP_0011; -.
DR   EnsemblBacteria; BAI60083; BAI60083; MCP_0011.
DR   KEGG; mpd:MCP_0011; -.
DR   eggNOG; arCOG04176; Archaea.
DR   eggNOG; COG1976; LUCA.
DR   HOGENOM; HOG000230604; -.
DR   KO; K03264; -.
DR   OMA; GEDTTGP; -.
DR   Proteomes; UP000001882; Chromosome.
DR   GO; GO:0043022; F:ribosome binding; IEA:InterPro.
DR   GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0042256; P:mature ribosome assembly; IEA:InterPro.
DR   HAMAP; MF_00032; eIF_6; 1.
DR   InterPro; IPR002769; eIF6.
DR   PANTHER; PTHR10784; PTHR10784; 1.
DR   Pfam; PF01912; eIF-6; 1.
DR   PIRSF; PIRSF006413; IF-6; 1.
DR   SMART; SM00654; eIF6; 1.
DR   TIGRFAMs; TIGR00323; eIF-6; 1.
PE   3: Inferred from homology;
DR   PRODOM; D1YUG1.
DR   SWISS-2DPAGE; D1YUG1.
KW   Initiation factor {ECO:0000256|HAMAP-Rule:MF_00032,
KW   ECO:0000313|EMBL:BAI60083.1};
KW   Protein biosynthesis {ECO:0000256|HAMAP-Rule:MF_00032};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001882}.
SQ   SEQUENCE   220 AA;  23120 MW;  B9ACD5468DAF2F98 CRC64;
     MIRQLDFYGY PYVGIYGANT ENYVVLPPDL PAHTADEAAE TLGVAAIRTL INDSTLIGSM
     MTGNSNGFIV SDLALEREVA ALEKALPTAR LKGKMTAAGN IILANDTAAL VHPALSDRHL
     EVIRDTLKVD VRRGTIGGLK TVGMAGVATN KGLLVHPRAT EEELSALEEL FRLPVDIGTV
     SFGSPLVGSA ILATTKGLVT GTKTSGPEVG RIEDALQLGE
//

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