(data stored in SCRATCH zone)

SWISSPROT: D1YUT0_METPS

ID   D1YUT0_METPS            Unreviewed;       188 AA.
AC   D1YUT0;
DT   09-FEB-2010, integrated into UniProtKB/TrEMBL.
DT   09-FEB-2010, sequence version 1.
DT   11-DEC-2019, entry version 49.
DE   RecName: Full=TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408};
DE   AltName: Full=Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408};
DE            Short=BAP {ECO:0000256|HAMAP-Rule:MF_00408};
DE   AltName: Full=TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408};
DE            Short=TBP {ECO:0000256|HAMAP-Rule:MF_00408};
DE   AltName: Full=TATA-box factor {ECO:0000256|HAMAP-Rule:MF_00408};
GN   Name=tbp-1 {ECO:0000313|EMBL:BAI60202.1};
GN   Synonyms=tbp {ECO:0000256|HAMAP-Rule:MF_00408};
GN   OrderedLocusNames=MCP_0130 {ECO:0000313|EMBL:BAI60202.1};
OS   Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /
OS   SANAE).
OC   Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC   Methanocellales; Methanocellaceae; Methanocella.
OX   NCBI_TaxID=304371 {ECO:0000313|EMBL:BAI60202.1, ECO:0000313|Proteomes:UP000001882};
RN   [1] {ECO:0000313|Proteomes:UP000001882}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 17711 / JCM 13418 / NBRC 101707 / SANAE
RC   {ECO:0000313|Proteomes:UP000001882};
RX   PubMed=21829548; DOI=10.1371/journal.pone.0022898;
RA   Sakai S., Takaki Y., Shimamura S., Sekine M., Tajima T., Kosugi H.,
RA   Ichikawa N., Tasumi E., Hiraki A.T., Shimizu A., Kato Y., Nishiko R.,
RA   Mori K., Fujita N., Imachi H., Takai K.;
RT   "Genome sequence of a mesophilic hydrogenotrophic methanogen Methanocella
RT   paludicola, the first cultivated representative of the order
RT   Methanocellales.";
RL   PLoS ONE 6:E22898-E22898(2011).
CC   -!- FUNCTION: General factor that plays a role in the activation of
CC       archaeal genes transcribed by RNA polymerase. Binds specifically to the
CC       TATA box promoter element which lies close to the position of
CC       transcription initiation. {ECO:0000256|HAMAP-Rule:MF_00408,
CC       ECO:0000256|RuleBase:RU000523}.
CC   -!- SIMILARITY: Belongs to the TBP family. {ECO:0000256|HAMAP-
CC       Rule:MF_00408, ECO:0000256|RuleBase:RU000523}.
CC   -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC       feature annotation. {ECO:0000256|HAMAP-Rule:MF_00408}.
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DR   EMBL; AP011532; BAI60202.1; -; Genomic_DNA.
DR   STRING; 304371.MCP_0130; -.
DR   EnsemblBacteria; BAI60202; BAI60202; MCP_0130.
DR   KEGG; mpd:MCP_0130; -.
DR   PATRIC; fig|304371.9.peg.136; -.
DR   eggNOG; arCOG01764; Archaea.
DR   eggNOG; COG2101; LUCA.
DR   HOGENOM; HOG000105163; -.
DR   KO; K03120; -.
DR   OMA; NCEYEPE; -.
DR   Proteomes; UP000001882; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   CDD; cd04518; TBP_archaea; 1.
DR   Gene3D; 3.30.310.10; -; 2.
DR   HAMAP; MF_00408; TATA_bind_prot_arch; 1.
DR   InterPro; IPR000814; TBP.
DR   InterPro; IPR033711; TBP_archaea.
DR   InterPro; IPR030491; TBP_CS.
DR   InterPro; IPR012295; TBP_dom_sf.
DR   PANTHER; PTHR10126; PTHR10126; 1.
DR   Pfam; PF00352; TBP; 2.
DR   PRINTS; PR00686; TIFACTORIID.
DR   PROSITE; PS00351; TFIID; 1.
PE   3: Inferred from homology;
DR   PRODOM; D1YUT0.
DR   SWISS-2DPAGE; D1YUT0.
KW   DNA-binding {ECO:0000256|HAMAP-Rule:MF_00408,
KW   ECO:0000256|RuleBase:RU000523};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001882};
KW   Repeat {ECO:0000256|HAMAP-Rule:MF_00408};
KW   Transcription {ECO:0000256|HAMAP-Rule:MF_00408,
KW   ECO:0000256|RuleBase:RU000523};
KW   Transcription regulation {ECO:0000256|HAMAP-Rule:MF_00408,
KW   ECO:0000256|RuleBase:RU000523}.
FT   REPEAT          13..89
FT                   /note="1"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_00408"
SQ   SEQUENCE   188 AA;  20248 MW;  AAB06A0C78064FBB CRC64;
     MSKAEEAKKT ITIENVVAST AIGQEIDLKS VTLALEGADY DPEQFPGLVY RTKDPKTAAL
     IFRSGKIVCT GAKSIEDVDR GLKKVFKKMD SVGIKVDQNP EITVQNIVAS ADLGSVLNLN
     AIAIGLGLEN IEYEPEQFPG LVYRLDHPKV VVLLFGSGKL VVTGGKKPKD AEEAVDRIVK
     ELEGLALL
//

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