(data stored in SCRATCH zone)

SWISSPROT: D1YVK5_METPS

ID   D1YVK5_METPS            Unreviewed;       123 AA.
AC   D1YVK5;
DT   09-FEB-2010, integrated into UniProtKB/TrEMBL.
DT   09-FEB-2010, sequence version 1.
DT   11-DEC-2019, entry version 45.
DE   SubName: Full=Putative HTH-type transcriptional regulator {ECO:0000313|EMBL:BAI60477.1};
GN   OrderedLocusNames=MCP_0405 {ECO:0000313|EMBL:BAI60477.1};
OS   Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /
OS   SANAE).
OC   Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC   Methanocellales; Methanocellaceae; Methanocella.
OX   NCBI_TaxID=304371 {ECO:0000313|EMBL:BAI60477.1, ECO:0000313|Proteomes:UP000001882};
RN   [1] {ECO:0000313|Proteomes:UP000001882}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 17711 / JCM 13418 / NBRC 101707 / SANAE
RC   {ECO:0000313|Proteomes:UP000001882};
RX   PubMed=21829548; DOI=10.1371/journal.pone.0022898;
RA   Sakai S., Takaki Y., Shimamura S., Sekine M., Tajima T., Kosugi H.,
RA   Ichikawa N., Tasumi E., Hiraki A.T., Shimizu A., Kato Y., Nishiko R.,
RA   Mori K., Fujita N., Imachi H., Takai K.;
RT   "Genome sequence of a mesophilic hydrogenotrophic methanogen Methanocella
RT   paludicola, the first cultivated representative of the order
RT   Methanocellales.";
RL   PLoS ONE 6:E22898-E22898(2011).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AP011532; BAI60477.1; -; Genomic_DNA.
DR   STRING; 304371.MCP_0405; -.
DR   EnsemblBacteria; BAI60477; BAI60477; MCP_0405.
DR   KEGG; mpd:MCP_0405; -.
DR   eggNOG; arCOG00017; Archaea.
DR   eggNOG; COG2522; LUCA.
DR   HOGENOM; HOG000225311; -.
DR   KO; K07108; -.
DR   OMA; TCEIMVQ; -.
DR   BioCyc; MPAL304371:GI7G-417-MONOMER; -.
DR   Proteomes; UP000001882; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   CDD; cd00093; HTH_XRE; 1.
DR   Gene3D; 1.10.260.40; -; 1.
DR   InterPro; IPR001387; Cro/C1-type_HTH.
DR   InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR   Pfam; PF01381; HTH_3; 1.
DR   SMART; SM00530; HTH_XRE; 1.
DR   SUPFAM; SSF47413; SSF47413; 1.
DR   PROSITE; PS50943; HTH_CROC1; 1.
PE   4: Predicted;
DR   PRODOM; D1YVK5.
DR   SWISS-2DPAGE; D1YVK5.
KW   Reference proteome {ECO:0000313|Proteomes:UP000001882}.
FT   DOMAIN          20..74
FT                   /note="HTH cro/C1-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50943"
SQ   SEQUENCE   123 AA;  13177 MW;  4EB89005EC7D4A63 CRC64;
     MRPPCELTVW YVIPTIRAEL SKELIKLGLS QKEVSERLGI TQSAVSQYVK DKRGKGVPVN
     KEVRKAIKAL ARDIAAGNAG KGVIPGICAV CAIVKQSGSL CDLHRQEDAD LEGCDMCLNI
     SGG
//

If you have problems or comments...

PBIL Back to PBIL home page