(data stored in SCRATCH zone)

SWISSPROT: D1YVV2_METPS

ID   D1YVV2_METPS            Unreviewed;       165 AA.
AC   D1YVV2;
DT   09-FEB-2010, integrated into UniProtKB/TrEMBL.
DT   09-FEB-2010, sequence version 1.
DT   11-DEC-2019, entry version 36.
DE   RecName: Full=TrmB domain-containing protein {ECO:0000259|Pfam:PF01978};
GN   OrderedLocusNames=MCP_0502 {ECO:0000313|EMBL:BAI60574.1};
OS   Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /
OS   SANAE).
OC   Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC   Methanocellales; Methanocellaceae; Methanocella.
OX   NCBI_TaxID=304371 {ECO:0000313|EMBL:BAI60574.1, ECO:0000313|Proteomes:UP000001882};
RN   [1] {ECO:0000313|Proteomes:UP000001882}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 17711 / JCM 13418 / NBRC 101707 / SANAE
RC   {ECO:0000313|Proteomes:UP000001882};
RX   PubMed=21829548; DOI=10.1371/journal.pone.0022898;
RA   Sakai S., Takaki Y., Shimamura S., Sekine M., Tajima T., Kosugi H.,
RA   Ichikawa N., Tasumi E., Hiraki A.T., Shimizu A., Kato Y., Nishiko R.,
RA   Mori K., Fujita N., Imachi H., Takai K.;
RT   "Genome sequence of a mesophilic hydrogenotrophic methanogen Methanocella
RT   paludicola, the first cultivated representative of the order
RT   Methanocellales.";
RL   PLoS ONE 6:E22898-E22898(2011).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AP011532; BAI60574.1; -; Genomic_DNA.
DR   STRING; 304371.MCP_0502; -.
DR   EnsemblBacteria; BAI60574; BAI60574; MCP_0502.
DR   KEGG; mpd:MCP_0502; -.
DR   eggNOG; arCOG02795; Archaea.
DR   eggNOG; COG1510; LUCA.
DR   HOGENOM; HOG000120337; -.
DR   OMA; LDEIMRM; -.
DR   BioCyc; MPAL304371:GI7G-516-MONOMER; -.
DR   Proteomes; UP000001882; Chromosome.
DR   CDD; cd00090; HTH_ARSR; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR011991; ArsR-like_HTH.
DR   InterPro; IPR002831; Tscrpt_reg_TrmB_N.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF01978; TrmB; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
PE   4: Predicted;
DR   PRODOM; D1YVV2.
DR   SWISS-2DPAGE; D1YVV2.
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001882}.
FT   DOMAIN          35..87
FT                   /note="TrmB"
FT                   /evidence="ECO:0000259|Pfam:PF01978"
FT   COILED          139..159
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   165 AA;  18811 MW;  B0F4778E43166F60 CRC64;
     MAKSYSDIIQ EREAILGTFE ALFKARGLGA LHGRVFGAIL LAVDPVTQDE ISEFTGYSVP
     AVSSALEELV RVGLVARQKR QESRKNYYSS RANLDEIMRM VLKTIHDDYV LVVLNRLQYS
     KADAEGTQDP KLSEHVEFIE NYEARLRDLE SYMNRLLDVP LEEKK
//

If you have problems or comments...

PBIL Back to PBIL home page