(data stored in SCRATCH zone)

SWISSPROT: D2GV37_AILME

ID   D2GV37_AILME            Unreviewed;       128 AA.
AC   D2GV37;
DT   09-FEB-2010, integrated into UniProtKB/TrEMBL.
DT   09-FEB-2010, sequence version 1.
DT   30-AUG-2017, entry version 71.
DE   SubName: Full=Ribosomal protein L40 {ECO:0000313|EMBL:AEA39530.1};
DE   SubName: Full=Ubiquitin A-52 residue ribosomal protein fusion product 1 {ECO:0000313|Ensembl:ENSAMEP00000011952};
DE   Flags: Fragment;
GN   Name=UBA52 {ECO:0000313|Ensembl:ENSAMEP00000011952};
GN   Synonyms=Rpl40 {ECO:0000313|EMBL:AEA39530.1};
GN   ORFNames=PANDA_000559 {ECO:0000313|EMBL:EFB19126.1};
OS   Ailuropoda melanoleuca (Giant panda).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae;
OC   Ailuropoda.
OX   NCBI_TaxID=9646;
RN   [1] {ECO:0000313|EMBL:EFB19126.1, ECO:0000313|Ensembl:ENSAMEP00000011952}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=20010809; DOI=10.1038/nature08696;
RA   Li R., Fan W., Tian G., Zhu H., He L., Cai J., Huang Q., Cai Q.,
RA   Li B., Bai Y., Zhang Z., Zhang Y., Wang W., Li J., Wei F., Li H.,
RA   Jian M., Li J., Zhang Z., Nielsen R., Li D., Gu W., Yang Z., Xuan Z.,
RA   Ryder O.A., Leung F.C., Zhou Y., Cao J., Sun X., Fu Y., Fang X.,
RA   Guo X., Wang B., Hou R., Shen F., Mu B., Ni P., Lin R., Qian W.,
RA   Wang G., Yu C., Nie W., Wang J., Wu Z., Liang H., Min J., Wu Q.,
RA   Cheng S., Ruan J., Wang M., Shi Z., Wen M., Liu B., Ren X., Zheng H.,
RA   Dong D., Cook K., Shan G., Zhang H., Kosiol C., Xie X., Lu Z.,
RA   Zheng H., Li Y., Steiner C.C., Lam T.T., Lin S., Zhang Q., Li G.,
RA   Tian J., Gong T., Liu H., Zhang D., Fang L., Ye C., Zhang J., Hu W.,
RA   Xu A., Ren Y., Zhang G., Bruford M.W., Li Q., Ma L., Guo Y., An N.,
RA   Hu Y., Zheng Y., Shi Y., Li Z., Liu Q., Chen Y., Zhao J., Qu N.,
RA   Zhao S., Tian F., Wang X., Wang H., Xu L., Liu X., Vinar T., Wang Y.,
RA   Lam T.W., Yiu S.M., Liu S., Zhang H., Li D., Huang Y., Wang X.,
RA   Yang G., Jiang Z., Wang J., Qin N., Li L., Li J., Bolund L.,
RA   Kristiansen K., Wong G.K., Olson M., Zhang X., Li S., Yang H.,
RA   Wang J., Wang J.;
RT   "The sequence and de novo assembly of the giant panda genome.";
RL   Nature 463:311-317(2010).
RN   [2] {ECO:0000313|EMBL:AEA39580.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Hou Y., Hou W., Zhang T.;
RL   Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:AEA39530.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Hou Y., Hou W.;
RL   Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases.
RN   [4] {ECO:0000313|Ensembl:ENSAMEP00000011952}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (SEP-2011) to UniProtKB.
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DR   EMBL; ACTA01168565; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; HQ318095; AEA39530.1; -; mRNA.
DR   EMBL; HQ318096; AEA39580.1; -; Genomic_DNA.
DR   EMBL; GL192348; EFB19126.1; -; Genomic_DNA.
DR   RefSeq; NP_001291836.1; NM_001304907.1.
DR   RefSeq; XP_002912779.1; XM_002912733.3.
DR   RefSeq; XP_019652533.1; XM_019796974.1.
DR   STRING; 9646.ENSAMEP00000011952; -.
DR   Ensembl; ENSAMET00000012457; ENSAMEP00000011952; ENSAMEG00000011356.
DR   GeneID; 100479143; -.
DR   KEGG; aml:100479143; -.
DR   CTD; 7311; -.
DR   eggNOG; KOG0003; Eukaryota.
DR   eggNOG; COG1552; LUCA.
DR   eggNOG; COG5272; LUCA.
DR   GeneTree; ENSGT00870000136502; -.
DR   HOGENOM; HOG000233942; -.
DR   KO; K02927; -.
DR   OMA; RKTKCGH; -.
DR   OrthoDB; EOG091G178I; -.
DR   TreeFam; TF352129; -.
DR   Proteomes; UP000008912; Unassembled WGS sequence.
DR   GO; GO:0005829; C:cytosol; IEA:Ensembl.
DR   GO; GO:0005783; C:endoplasmic reticulum; IEA:Ensembl.
DR   GO; GO:0070062; C:extracellular exosome; IEA:Ensembl.
DR   GO; GO:0005765; C:lysosomal membrane; IEA:Ensembl.
DR   GO; GO:0043209; C:myelin sheath; IEA:Ensembl.
DR   GO; GO:0005654; C:nucleoplasm; IEA:Ensembl.
DR   GO; GO:0005886; C:plasma membrane; IEA:Ensembl.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:InterPro.
DR   InterPro; IPR001975; Ribosomal_L40e.
DR   InterPro; IPR019956; Ubiquitin.
DR   InterPro; IPR029071; Ubiquitin-rel_dom.
DR   InterPro; IPR019954; Ubiquitin_CS.
DR   InterPro; IPR000626; Ubiquitin_dom.
DR   Pfam; PF01020; Ribosomal_L40e; 1.
DR   Pfam; PF00240; ubiquitin; 1.
DR   PRINTS; PR00348; UBIQUITIN.
DR   SMART; SM01377; Ribosomal_L40e; 1.
DR   SMART; SM00213; UBQ; 1.
DR   SUPFAM; SSF54236; SSF54236; 1.
DR   PROSITE; PS00299; UBIQUITIN_1; 1.
DR   PROSITE; PS50053; UBIQUITIN_2; 1.
PE   2: Evidence at transcript level;
DR   PRODOM; D2GV37.
DR   SWISS-2DPAGE; D2GV37.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008912};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008912};
KW   Ribonucleoprotein {ECO:0000313|EMBL:AEA39530.1};
KW   Ribosomal protein {ECO:0000313|EMBL:AEA39530.1}.
FT   DOMAIN        1     76       Ubiquitin-like. {ECO:0000259|PROSITE:
FT                                PS50053}.
FT   NON_TER     128    128       {ECO:0000313|EMBL:EFB19126.1}.
SQ   SEQUENCE   128 AA;  14728 MW;  7BCB602ABEFAD02A CRC64;
     MQIFVKTLTG KTITLEVEPS DTIENVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN
     IQKESTLHLV LRLRGGIIEP SLRQLAQKYN CDKMICRKCY ARLHPRAVNC RKKKCGHTNN
     LRPKKKVK
//

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