(data stored in SCRATCH zone)

SWISSPROT: D3VG46_XENNA

ID   D3VG46_XENNA            Unreviewed;       329 AA.
AC   D3VG46;
DT   20-APR-2010, integrated into UniProtKB/TrEMBL.
DT   20-APR-2010, sequence version 1.
DT   08-MAY-2019, entry version 59.
DE   SubName: Full=Transcriptional repressor for ribose metabolism (GalR/LacI family) {ECO:0000313|EMBL:CBJ88136.1};
GN   Name=rbsR {ECO:0000313|EMBL:CBJ88136.1};
GN   OrderedLocusNames=XNC1_0043 {ECO:0000313|EMBL:CBJ88136.1};
OS   Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 /
OS   NCIB 9965 / AN6).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Morganellaceae; Xenorhabdus.
OX   NCBI_TaxID=406817 {ECO:0000313|EMBL:CBJ88136.1, ECO:0000313|Proteomes:UP000008075};
RN   [1] {ECO:0000313|Proteomes:UP000008075}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6
RC   {ECO:0000313|Proteomes:UP000008075};
RA   Goodrich-Blair H., Barbazuk B., Bode H.B., Darby C., Du Z., Forst S.,
RA   Gaudriault S., Goldman B.S., Goodner B., Henkhaus J., Latreille P.,
RA   Medigue C., Miller N., Norton S., Ogier J.C., Rouy Z., Slater S.,
RA   Suen G.;
RT   "Complete genome sequence of Xenorhabdus nematophila (strain ATCC
RT   19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6).";
RL   Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:CBJ88136.1, ECO:0000313|Proteomes:UP000008075}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6
RC   {ECO:0000313|Proteomes:UP000008075};
RX   PubMed=22125637; DOI=10.1371/journal.pone.0027909;
RA   Chaston J.M., Suen G., Tucker S.L., Andersen A.W., Bhasin A., Bode E.,
RA   Bode H.B., Brachmann A.O., Cowles C.E., Cowles K.N., Darby C.,
RA   de Leon L., Drace K., Du Z., Givaudan A., Herbert Tran E.E.,
RA   Jewell K.A., Knack J.J., Krasomil-Osterfeld K.C., Kukor R., Lanois A.,
RA   Latreille P., Leimgruber N.K., Lipke C.M., Liu R., Lu X.,
RA   Martens E.C., Marri P.R., Medigue C., Menard M.L., Miller N.M.,
RA   Morales-Soto N., Norton S., Ogier J.C., Orchard S.S., Park D.,
RA   Park Y., Qurollo B.A., Sugar D.R., Richards G.R., Rouy Z.,
RA   Slominski B., Slominski K., Snyder H., Tjaden B.C., van der Hoeven R.,
RA   Welch R.D., Wheeler C., Xiang B., Barbazuk B., Gaudriault S.,
RA   Goodner B., Slater S.C., Forst S., Goldman B.S., Goodrich-Blair H.;
RT   "The entomopathogenic bacterial endosymbionts xenorhabdus and
RT   photorhabdus: convergent lifestyles from divergent genomes.";
RL   PLoS ONE 6:e27909-e27909(2011).
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DR   EMBL; FN667742; CBJ88136.1; -; Genomic_DNA.
DR   STRING; 406817.XNC1_0043; -.
DR   EnsemblBacteria; CBJ88136; CBJ88136; XNC1_0043.
DR   KEGG; xne:XNC1_0043; -.
DR   eggNOG; ENOG4105ETE; Bacteria.
DR   eggNOG; COG1609; LUCA.
DR   HOGENOM; HOG000220180; -.
DR   KO; K02529; -.
DR   OMA; IMQRYPS; -.
DR   Proteomes; UP000008075; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR   CDD; cd01392; HTH_LacI; 1.
DR   InterPro; IPR000843; HTH_LacI.
DR   InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR   InterPro; IPR028082; Peripla_BP_I.
DR   Pfam; PF00356; LacI; 1.
DR   SMART; SM00354; HTH_LACI; 1.
DR   SUPFAM; SSF47413; SSF47413; 1.
DR   SUPFAM; SSF53822; SSF53822; 1.
DR   PROSITE; PS50932; HTH_LACI_2; 1.
PE   4: Predicted;
DR   PRODOM; D3VG46.
DR   SWISS-2DPAGE; D3VG46.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008075};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00728028};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008075};
KW   Transcription {ECO:0000256|SAAS:SAAS00729290};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00728142}.
FT   DOMAIN        1     53       HTH lacI-type. {ECO:0000259|PROSITE:
FT                                PS50932}.
SQ   SEQUENCE   329 AA;  36672 MW;  56810D9C4691EF93 CRC64;
     MKDVARLAGV STSTVSHVIN NNRYVSEKIK KRVNAAIEEL NYTPSALARS LKIKQTKTIG
     MLVTSSDNSF YSEVVRGVEQ SCYERGYSLI LHTEGNLTRM LRCMETLLQK RVDGLLIMCS
     EQQLISKDFF LRYPLAPIVT MDWSPFDVSS DVIKDNSLLG GELATNYLIS RGFRKIACIA
     GPQDKMPAQQ RLFGYRKAMR DAGLEISEGY EIYSNFEFSG GFLSMKQLLQ LPEPPEAVFA
     SNDAMAIGVY QALYQSGLSV PKDISVIGYD DIAIAPYLTP PLTTIHQSKG ELGKLAIDTL
     LYRMDNPESE PKELILTPAL VERSSVARR
//

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