(data stored in SCRATCH zone)

SWISSPROT: D3VHZ0_XENNA

ID   D3VHZ0_XENNA            Unreviewed;       401 AA.
AC   D3VHZ0;
DT   20-APR-2010, integrated into UniProtKB/TrEMBL.
DT   20-APR-2010, sequence version 1.
DT   16-JAN-2019, entry version 45.
DE   SubName: Full=Protein in late step of protoheme IX synthesis with TPR-like domain {ECO:0000313|EMBL:CBJ88479.1};
GN   Name=hemY {ECO:0000313|EMBL:CBJ88479.1};
GN   OrderedLocusNames=XNC1_0402 {ECO:0000313|EMBL:CBJ88479.1};
OS   Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 /
OS   NCIB 9965 / AN6).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Morganellaceae; Xenorhabdus.
OX   NCBI_TaxID=406817 {ECO:0000313|EMBL:CBJ88479.1, ECO:0000313|Proteomes:UP000008075};
RN   [1] {ECO:0000313|Proteomes:UP000008075}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6
RC   {ECO:0000313|Proteomes:UP000008075};
RA   Goodrich-Blair H., Barbazuk B., Bode H.B., Darby C., Du Z., Forst S.,
RA   Gaudriault S., Goldman B.S., Goodner B., Henkhaus J., Latreille P.,
RA   Medigue C., Miller N., Norton S., Ogier J.C., Rouy Z., Slater S.,
RA   Suen G.;
RT   "Complete genome sequence of Xenorhabdus nematophila (strain ATCC
RT   19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6).";
RL   Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:CBJ88479.1, ECO:0000313|Proteomes:UP000008075}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6
RC   {ECO:0000313|Proteomes:UP000008075};
RX   PubMed=22125637; DOI=10.1371/journal.pone.0027909;
RA   Chaston J.M., Suen G., Tucker S.L., Andersen A.W., Bhasin A., Bode E.,
RA   Bode H.B., Brachmann A.O., Cowles C.E., Cowles K.N., Darby C.,
RA   de Leon L., Drace K., Du Z., Givaudan A., Herbert Tran E.E.,
RA   Jewell K.A., Knack J.J., Krasomil-Osterfeld K.C., Kukor R., Lanois A.,
RA   Latreille P., Leimgruber N.K., Lipke C.M., Liu R., Lu X.,
RA   Martens E.C., Marri P.R., Medigue C., Menard M.L., Miller N.M.,
RA   Morales-Soto N., Norton S., Ogier J.C., Orchard S.S., Park D.,
RA   Park Y., Qurollo B.A., Sugar D.R., Richards G.R., Rouy Z.,
RA   Slominski B., Slominski K., Snyder H., Tjaden B.C., van der Hoeven R.,
RA   Welch R.D., Wheeler C., Xiang B., Barbazuk B., Gaudriault S.,
RA   Goodner B., Slater S.C., Forst S., Goldman B.S., Goodrich-Blair H.;
RT   "The entomopathogenic bacterial endosymbionts xenorhabdus and
RT   photorhabdus: convergent lifestyles from divergent genomes.";
RL   PLoS ONE 6:e27909-e27909(2011).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; FN667742; CBJ88479.1; -; Genomic_DNA.
DR   RefSeq; WP_013183255.1; NC_014228.1.
DR   STRING; 406817.XNC1_0402; -.
DR   EnsemblBacteria; CBJ88479; CBJ88479; XNC1_0402.
DR   KEGG; xne:XNC1_0402; -.
DR   eggNOG; ENOG410601J; Bacteria.
DR   eggNOG; COG3071; LUCA.
DR   HOGENOM; HOG000270888; -.
DR   KO; K02498; -.
DR   OMA; WGKARDY; -.
DR   Proteomes; UP000008075; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0042168; P:heme metabolic process; IEA:InterPro.
DR   Gene3D; 1.25.40.10; -; 2.
DR   InterPro; IPR005254; Heme_biosyn_assoc_TPR_pro.
DR   InterPro; IPR010817; HemY_N.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   Pfam; PF07219; HemY_N; 1.
DR   SUPFAM; SSF48452; SSF48452; 2.
DR   TIGRFAMs; TIGR00540; TPR_hemY_coli; 1.
PE   4: Predicted;
DR   PRODOM; D3VHZ0.
DR   SWISS-2DPAGE; D3VHZ0.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008075};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008075};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     38     62       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN       26    133       HemY_N. {ECO:0000259|Pfam:PF07219}.
SQ   SEQUENCE   401 AA;  45288 MW;  22D3E2A56F6CE547 CRC64;
     MLKILLLFII LIVGIILGPV MSGHQGYVLI QTDSNNITTS ITAVVIMFLL LQFLLIFIGW
     CYRRLKRTST STHSWIFGGF KRNRARSQTR QALLKLAEGD FKQVEHLMTR NADHAEYPVV
     NYLLAAEAAQ QRGDYFHTNQ YIERAAEVAD KDQLPVDISR VRIQLAQGEI HAARNGVDKL
     LNHAPRHPEV LRLAERAYSL SGAYQALIDV LPSMIKAKLY DEEKIHAIRQ QAYVGLMNQV
     FAEKGCTGLK AWWKDQGRKI RQDIVLQVVM AEHLIACNDH DTAQQIILDG LKQQYDERLL
     LLIPHLKAND AEAIQKNLTH LLKQHGATPL LNSTMGQVAL RHGEWANAEA AFKAALAQRP
     DAHDYAWLAD ALDKLQKHEE ATQTRSKGFM LTLKRDSNTG A
//

If you have problems or comments...

PBIL Back to PBIL home page