(data stored in SCRATCH zone)
SWISSPROT: D3VIN8_XENNA
ID D3VIN8_XENNA Unreviewed; 1013 AA.
AC D3VIN8;
DT 20-APR-2010, integrated into UniProtKB/TrEMBL.
DT 20-APR-2010, sequence version 1.
DT 16-JAN-2019, entry version 46.
DE SubName: Full=Putative invasin {ECO:0000313|EMBL:CBJ88588.1};
GN OrderedLocusNames=XNC1_0514 {ECO:0000313|EMBL:CBJ88588.1};
OS Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 /
OS NCIB 9965 / AN6).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Morganellaceae; Xenorhabdus.
OX NCBI_TaxID=406817 {ECO:0000313|EMBL:CBJ88588.1, ECO:0000313|Proteomes:UP000008075};
RN [1] {ECO:0000313|Proteomes:UP000008075}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6
RC {ECO:0000313|Proteomes:UP000008075};
RA Goodrich-Blair H., Barbazuk B., Bode H.B., Darby C., Du Z., Forst S.,
RA Gaudriault S., Goldman B.S., Goodner B., Henkhaus J., Latreille P.,
RA Medigue C., Miller N., Norton S., Ogier J.C., Rouy Z., Slater S.,
RA Suen G.;
RT "Complete genome sequence of Xenorhabdus nematophila (strain ATCC
RT 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6).";
RL Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:CBJ88588.1, ECO:0000313|Proteomes:UP000008075}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6
RC {ECO:0000313|Proteomes:UP000008075};
RX PubMed=22125637; DOI=10.1371/journal.pone.0027909;
RA Chaston J.M., Suen G., Tucker S.L., Andersen A.W., Bhasin A., Bode E.,
RA Bode H.B., Brachmann A.O., Cowles C.E., Cowles K.N., Darby C.,
RA de Leon L., Drace K., Du Z., Givaudan A., Herbert Tran E.E.,
RA Jewell K.A., Knack J.J., Krasomil-Osterfeld K.C., Kukor R., Lanois A.,
RA Latreille P., Leimgruber N.K., Lipke C.M., Liu R., Lu X.,
RA Martens E.C., Marri P.R., Medigue C., Menard M.L., Miller N.M.,
RA Morales-Soto N., Norton S., Ogier J.C., Orchard S.S., Park D.,
RA Park Y., Qurollo B.A., Sugar D.R., Richards G.R., Rouy Z.,
RA Slominski B., Slominski K., Snyder H., Tjaden B.C., van der Hoeven R.,
RA Welch R.D., Wheeler C., Xiang B., Barbazuk B., Gaudriault S.,
RA Goodner B., Slater S.C., Forst S., Goldman B.S., Goodrich-Blair H.;
RT "The entomopathogenic bacterial endosymbionts xenorhabdus and
RT photorhabdus: convergent lifestyles from divergent genomes.";
RL PLoS ONE 6:e27909-e27909(2011).
CC -----------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC -----------------------------------------------------------------------
DR EMBL; FN667742; CBJ88588.1; -; Genomic_DNA.
DR RefSeq; WP_013183305.1; NC_014228.1.
DR STRING; 406817.XNC1_0514; -.
DR EnsemblBacteria; CBJ88588; CBJ88588; XNC1_0514.
DR KEGG; xne:XNC1_0514; -.
DR eggNOG; ENOG4105TNG; Bacteria.
DR eggNOG; ENOG410XQE6; LUCA.
DR HOGENOM; HOG000160465; -.
DR OMA; RYVWGDK; -.
DR BioCyc; XNEM406817:GHY4-491-MONOMER; -.
DR Proteomes; UP000008075; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0007155; P:cell adhesion; IEA:InterPro.
DR CDD; cd00118; LysM; 1.
DR Gene3D; 2.40.160.160; -; 1.
DR Gene3D; 2.60.40.10; -; 1.
DR Gene3D; 3.10.350.10; -; 1.
DR InterPro; IPR008541; DUF823.
DR InterPro; IPR024519; IAT_beta.
DR InterPro; IPR038177; IAT_beta_sf.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR003535; Intimin/invasin_bac.
DR InterPro; IPR008964; Invasin/intimin_cell_adhesion.
DR InterPro; IPR015217; Invasin_dom_3.
DR InterPro; IPR018392; LysM_dom.
DR InterPro; IPR036779; LysM_dom_sf.
DR Pfam; PF05689; DUF823; 1.
DR Pfam; PF11924; IAT_beta; 1.
DR Pfam; PF09134; Invasin_D3; 1.
DR PRINTS; PR01369; INTIMIN.
DR SUPFAM; SSF49373; SSF49373; 1.
DR PROSITE; PS51782; LYSM; 1.
PE 4: Predicted;
DR PRODOM; D3VIN8.
DR SWISS-2DPAGE; D3VIN8.
KW Complete proteome {ECO:0000313|Proteomes:UP000008075};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000008075};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 21 41 Helical. {ECO:0000256|SAM:Phobius}.
FT DOMAIN 59 107 LysM. {ECO:0000259|PROSITE:PS51782}.
SQ SEQUENCE 1013 AA; 111751 MW; 3002803EC9B11A1C CRC64;
MNKKFDKSRL HNQQGLLKRV AWVNIVTQLM FPLVGAFTPA LTTAETHTSQ NEKWAIPTEP
YILQSGETIN TVAKRYGLTV NGLKKINQLR TFDKPFTALG TGSEIDVPKP RENKFLPFNY
SALTHSTLSH STLSNSEPDN TPATDETSRR FAEASSQASH FLAQPSHIGK NAVSQLSHLA
MREANRQIQD WLGRYGTARV QANIDSRGRL NGSQLDMLLP LHDTKSQMIF TQFGLRRIDK
RNTINLGVGQ RQFFDGWMLG YNAFLDHDFT GENTRFGLGA EYARDYLKLG VNSYFRLSHW
KESRLLTDYD ERPANGFDLR AQGYVPSLPQ LGGKLVYEHY FGDEVGLINK DHRSTNPSAF
TAGINYTPIP LLTFVIDRRQ DASGNGETQF NMELNYEIGT PWAQQIDPGA VTFKRTLQGS
RYDLVDRNNQ IVLEYRKREV ISLAMDNSIV GNAGDIKPIH ISIKSKYGLK EIKWDAPGLF
ANGGTIKSQG GTHYLLTLPK YQIQGNNTYT VGAIAYDEKG NASNRAEMQL HVLRAEANAN
QSTFTAKDKE LAADGHSKTL LILALKNKQG DPISGIAPDI KLGASGLSGK GRDPQIETMQ
ETQPGIYQSL LTAGEKTGVL KITPQVDGIT IKPVEILFVH PEAPLIKNLT IFGKLAMGQT
LRATYTFNSN HGDATDKSRY VWGDKGSTDI SKGHAITESG KIPDYPLTLS DAGTVKELAV
QARNALGIIG NTNIVDTSMS AEQGNHTYDS GKGGTVRGLA DSMTTTISTG KVKKGESITL
TIKTLNHGKA VRNVAVRVNA IKALNRQNVS ESPTVLLNGQ SGIYQDFTDK QGMLSVVITD
PNGLGVKTTL SVTADRTAAP QTQDVIFTVV TSPDVDVANF WGHMDEAAVA ENGIVFTRPK
LQAEVTRMHF KAMDTHTEAG EVWPKRIHFG AELYCKGIHG TLPTKEELMG LYNAHPNNAM
HDIYGWPQQR AYRSSTPHIE KNSRKNEHYS VNIDLGVLHI VGKTTTEYTI CKQ
//
If you have problems or comments...
Back to PBIL home page