(data stored in SCRATCH zone)

SWISSPROT: D3VJD9_XENNA

ID   D3VJD9_XENNA            Unreviewed;        90 AA.
AC   D3VJD9;
DT   20-APR-2010, integrated into UniProtKB/TrEMBL.
DT   20-APR-2010, sequence version 1.
DT   08-MAY-2019, entry version 54.
DE   SubName: Full=DNA-binding protein HU-alpha (HU-2), plays a role in DNA replication and in rpo translation {ECO:0000313|EMBL:CBJ88695.1};
GN   Name=hupA {ECO:0000313|EMBL:CBJ88695.1};
GN   OrderedLocusNames=XNC1_0621 {ECO:0000313|EMBL:CBJ88695.1};
OS   Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 /
OS   NCIB 9965 / AN6).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Morganellaceae; Xenorhabdus.
OX   NCBI_TaxID=406817 {ECO:0000313|EMBL:CBJ88695.1, ECO:0000313|Proteomes:UP000008075};
RN   [1] {ECO:0000313|Proteomes:UP000008075}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6
RC   {ECO:0000313|Proteomes:UP000008075};
RA   Goodrich-Blair H., Barbazuk B., Bode H.B., Darby C., Du Z., Forst S.,
RA   Gaudriault S., Goldman B.S., Goodner B., Henkhaus J., Latreille P.,
RA   Medigue C., Miller N., Norton S., Ogier J.C., Rouy Z., Slater S.,
RA   Suen G.;
RT   "Complete genome sequence of Xenorhabdus nematophila (strain ATCC
RT   19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6).";
RL   Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:CBJ88695.1, ECO:0000313|Proteomes:UP000008075}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6
RC   {ECO:0000313|Proteomes:UP000008075};
RX   PubMed=22125637; DOI=10.1371/journal.pone.0027909;
RA   Chaston J.M., Suen G., Tucker S.L., Andersen A.W., Bhasin A., Bode E.,
RA   Bode H.B., Brachmann A.O., Cowles C.E., Cowles K.N., Darby C.,
RA   de Leon L., Drace K., Du Z., Givaudan A., Herbert Tran E.E.,
RA   Jewell K.A., Knack J.J., Krasomil-Osterfeld K.C., Kukor R., Lanois A.,
RA   Latreille P., Leimgruber N.K., Lipke C.M., Liu R., Lu X.,
RA   Martens E.C., Marri P.R., Medigue C., Menard M.L., Miller N.M.,
RA   Morales-Soto N., Norton S., Ogier J.C., Orchard S.S., Park D.,
RA   Park Y., Qurollo B.A., Sugar D.R., Richards G.R., Rouy Z.,
RA   Slominski B., Slominski K., Snyder H., Tjaden B.C., van der Hoeven R.,
RA   Welch R.D., Wheeler C., Xiang B., Barbazuk B., Gaudriault S.,
RA   Goodner B., Slater S.C., Forst S., Goldman B.S., Goodrich-Blair H.;
RT   "The entomopathogenic bacterial endosymbionts xenorhabdus and
RT   photorhabdus: convergent lifestyles from divergent genomes.";
RL   PLoS ONE 6:e27909-e27909(2011).
CC   -!- FUNCTION: Histone-like DNA-binding protein which is capable of
CC       wrapping DNA to stabilize it, and thus to prevent its denaturation
CC       under extreme environmental conditions.
CC       {ECO:0000256|SAAS:SAAS01174625}.
CC   -!- SIMILARITY: Belongs to the bacterial histone-like protein family.
CC       {ECO:0000256|RuleBase:RU003939, ECO:0000256|SAAS:SAAS00560676}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; FN667742; CBJ88695.1; -; Genomic_DNA.
DR   RefSeq; WP_010848914.1; NC_014228.1.
DR   STRING; 406817.XNC1_0621; -.
DR   EnsemblBacteria; CBJ88695; CBJ88695; XNC1_0621.
DR   GeneID; 34868438; -.
DR   KEGG; xne:XNC1_0621; -.
DR   eggNOG; ENOG4105K70; Bacteria.
DR   eggNOG; COG0776; LUCA.
DR   HOGENOM; HOG000043828; -.
DR   KO; K05787; -.
DR   OMA; MNSITYE; -.
DR   Proteomes; UP000008075; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0030261; P:chromosome condensation; IEA:UniProtKB-KW.
DR   Gene3D; 4.10.520.10; -; 1.
DR   InterPro; IPR000119; Hist_DNA-bd.
DR   InterPro; IPR020816; Histone-like_DNA-bd_CS.
DR   InterPro; IPR010992; IHF-like_DNA-bd_dom_sf.
DR   PANTHER; PTHR33175; PTHR33175; 1.
DR   Pfam; PF00216; Bac_DNA_binding; 1.
DR   PRINTS; PR01727; DNABINDINGHU.
DR   SMART; SM00411; BHL; 1.
DR   SUPFAM; SSF47729; SSF47729; 1.
DR   PROSITE; PS00045; HISTONE_LIKE; 1.
PE   3: Inferred from homology;
DR   PRODOM; D3VJD9.
DR   SWISS-2DPAGE; D3VJD9.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008075};
KW   DNA condensation {ECO:0000256|SAAS:SAAS01174637};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00560702,
KW   ECO:0000313|EMBL:CBJ88695.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008075}.
SQ   SEQUENCE   90 AA;  9365 MW;  5970A0F54E51A85D CRC64;
     MNKTELVDAI AAGADLTKTQ AKAALESTLN AITESLKNGD AVQLVGFGTF KVNHRAERTG
     RNPQTGKEIK IAAANVPAFS AGKALKDAVK
//

If you have problems or comments...

PBIL Back to PBIL home page