(data stored in SCRATCH zone)

SWISSPROT: D3VJE5_XENNA

ID   D3VJE5_XENNA            Unreviewed;       223 AA.
AC   D3VJE5;
DT   20-APR-2010, integrated into UniProtKB/TrEMBL.
DT   20-APR-2010, sequence version 1.
DT   08-MAY-2019, entry version 54.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CBJ88701.1};
GN   OrderedLocusNames=XNC1_0630 {ECO:0000313|EMBL:CBJ88701.1};
OS   Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 /
OS   NCIB 9965 / AN6).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Morganellaceae; Xenorhabdus.
OX   NCBI_TaxID=406817 {ECO:0000313|EMBL:CBJ88701.1, ECO:0000313|Proteomes:UP000008075};
RN   [1] {ECO:0000313|Proteomes:UP000008075}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6
RC   {ECO:0000313|Proteomes:UP000008075};
RA   Goodrich-Blair H., Barbazuk B., Bode H.B., Darby C., Du Z., Forst S.,
RA   Gaudriault S., Goldman B.S., Goodner B., Henkhaus J., Latreille P.,
RA   Medigue C., Miller N., Norton S., Ogier J.C., Rouy Z., Slater S.,
RA   Suen G.;
RT   "Complete genome sequence of Xenorhabdus nematophila (strain ATCC
RT   19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6).";
RL   Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:CBJ88701.1, ECO:0000313|Proteomes:UP000008075}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6
RC   {ECO:0000313|Proteomes:UP000008075};
RX   PubMed=22125637; DOI=10.1371/journal.pone.0027909;
RA   Chaston J.M., Suen G., Tucker S.L., Andersen A.W., Bhasin A., Bode E.,
RA   Bode H.B., Brachmann A.O., Cowles C.E., Cowles K.N., Darby C.,
RA   de Leon L., Drace K., Du Z., Givaudan A., Herbert Tran E.E.,
RA   Jewell K.A., Knack J.J., Krasomil-Osterfeld K.C., Kukor R., Lanois A.,
RA   Latreille P., Leimgruber N.K., Lipke C.M., Liu R., Lu X.,
RA   Martens E.C., Marri P.R., Medigue C., Menard M.L., Miller N.M.,
RA   Morales-Soto N., Norton S., Ogier J.C., Orchard S.S., Park D.,
RA   Park Y., Qurollo B.A., Sugar D.R., Richards G.R., Rouy Z.,
RA   Slominski B., Slominski K., Snyder H., Tjaden B.C., van der Hoeven R.,
RA   Welch R.D., Wheeler C., Xiang B., Barbazuk B., Gaudriault S.,
RA   Goodner B., Slater S.C., Forst S., Goldman B.S., Goodrich-Blair H.;
RT   "The entomopathogenic bacterial endosymbionts xenorhabdus and
RT   photorhabdus: convergent lifestyles from divergent genomes.";
RL   PLoS ONE 6:e27909-e27909(2011).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; FN667742; CBJ88701.1; -; Genomic_DNA.
DR   STRING; 406817.XNC1_0630; -.
DR   EnsemblBacteria; CBJ88701; CBJ88701; XNC1_0630.
DR   KEGG; xne:XNC1_0630; -.
DR   eggNOG; ENOG4108UJB; Bacteria.
DR   eggNOG; ENOG4111I90; LUCA.
DR   HOGENOM; HOG000273990; -.
DR   OMA; EFLHAPY; -.
DR   BioCyc; XNEM406817:GHY4-608-MONOMER; -.
DR   Proteomes; UP000008075; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   CDD; cd07377; WHTH_GntR; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   Gene3D; 1.20.120.530; -; 1.
DR   InterPro; IPR011711; GntR_C.
DR   InterPro; IPR008920; TF_FadR/GntR_C.
DR   InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF07729; FCD; 1.
DR   Pfam; PF00392; GntR; 1.
DR   PRINTS; PR00035; HTHGNTR.
DR   SMART; SM00895; FCD; 1.
DR   SMART; SM00345; HTH_GNTR; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   SUPFAM; SSF48008; SSF48008; 1.
DR   PROSITE; PS50949; HTH_GNTR; 1.
PE   4: Predicted;
DR   PRODOM; D3VJE5.
DR   SWISS-2DPAGE; D3VJE5.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008075};
KW   DNA-binding {ECO:0000256|SAAS:SAAS01113652};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008075};
KW   Transcription {ECO:0000256|SAAS:SAAS01113624};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS01113681}.
FT   DOMAIN       10     77       HTH gntR-type. {ECO:0000259|PROSITE:
FT                                PS50949}.
SQ   SEQUENCE   223 AA;  25193 MW;  9E7004F9F4DB9756 CRC64;
     MTMKKDHTPQ ILSKKIAETI RNKLVTGELL PGQQLSEAAL SKQLEISRNT LREVFRLLTQ
     EGLLKHEPNR GVFVATPDIG SILDIYRVRQ LIECQALIQA YSMHPSVAKM TEAIEIAQQC
     RDKKDWVGAG TANMCFHAAI VELTDSERLI AFYRNISAEL RLAFGILNNP ELLYAPYIDK
     NAHILELINS GQNELAAKKM KSYLELSERT ILAAYARKNN QEL
//

If you have problems or comments...

PBIL Back to PBIL home page