(data stored in SCRATCH zone)

SWISSPROT: D4YWV7_SPHJU

ID   D4YWV7_SPHJU            Unreviewed;       230 AA.
AC   D4YWV7;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   07-JUN-2017, entry version 47.
DE   SubName: Full=DNA polymerase III epsilon subunit {ECO:0000313|EMBL:BAI94839.1};
GN   Name=dnaQ {ECO:0000313|EMBL:BAI94839.1};
GN   OrderedLocusNames=SJA_C1-00050 {ECO:0000313|EMBL:BAI94839.1};
OS   Sphingobium japonicum (strain NBRC 101211 / UT26S).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=452662 {ECO:0000313|EMBL:BAI94839.1, ECO:0000313|Proteomes:UP000007753};
RN   [1] {ECO:0000313|EMBL:BAI94839.1, ECO:0000313|Proteomes:UP000007753}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 101211 / UT26S {ECO:0000313|Proteomes:UP000007753};
RX   PubMed=20817768; DOI=10.1128/JB.00961-10;
RA   Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A.,
RA   Fukui S., Fujita N., Tsuda M.;
RT   "Complete genome sequence of the representative gamma-
RT   hexachlorocyclohexane-degrading bacterium Sphingobium japonicum
RT   UT26.";
RL   J. Bacteriol. 192:5852-5853(2010).
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DR   EMBL; AP010803; BAI94839.1; -; Genomic_DNA.
DR   RefSeq; WP_013038688.1; NC_014006.1.
DR   ProteinModelPortal; D4YWV7; -.
DR   STRING; 452662.SJA_C1-00050; -.
DR   EnsemblBacteria; BAI94839; BAI94839; SJA_C1-00050.
DR   GeneID; 29271715; -.
DR   KEGG; sjp:SJA_C1-00050; -.
DR   eggNOG; ENOG4107RZZ; Bacteria.
DR   eggNOG; COG0847; LUCA.
DR   HOGENOM; HOG000258616; -.
DR   KO; K02342; -.
DR   OMA; RRYGIDN; -.
DR   OrthoDB; POG091H0294; -.
DR   Proteomes; UP000007753; Chromosome 1.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.
DR   GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR   CDD; cd06131; DNA_pol_III_epsilon_Ecoli_like; 1.
DR   Gene3D; 3.30.420.10; -; 1.
DR   InterPro; IPR006054; DnaQ.
DR   InterPro; IPR006309; DnaQ_proteo.
DR   InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR   InterPro; IPR012337; RNaseH-like_dom.
DR   Pfam; PF00929; RNase_T; 1.
DR   SMART; SM00479; EXOIII; 1.
DR   SUPFAM; SSF53098; SSF53098; 1.
DR   TIGRFAMs; TIGR00573; dnaq; 1.
DR   TIGRFAMs; TIGR01406; dnaQ_proteo; 1.
PE   4: Predicted;
DR   PRODOM; D4YWV7.
DR   SWISS-2DPAGE; D4YWV7.
KW   Complete proteome {ECO:0000313|Proteomes:UP000007753};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007753}.
FT   DOMAIN        2    172       Exonuclease. {ECO:0000259|SMART:SM00479}.
SQ   SEQUENCE   230 AA;  25560 MW;  7ECDA9173A07AB35 CRC64;
     MREIIFDTET TGFDPASGDR LVEIGCIELL NRVPTGRTFH AYYNPQRSMP AAAEAVHGLS
     DSFLRDKPLF SHGVEELLAF LEDSHLVAHN ARFDFGFLNH ELRLCGLPEV SMARMIDTVA
     IARQLHPGAK HSLDALCTRY GIDRSHRIKH GALLDAELLA QLYIELTGGR QIGLGLAQEE
     EKRVANMELA AEVAVRPVRP ARVFAASAEE LERHAAFVAT LEKPLWLEEA
//

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