(data stored in SCRATCH zone)

SWISSPROT: D4YX04_SPHJU

ID   D4YX04_SPHJU            Unreviewed;       487 AA.
AC   D4YX04;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   07-JUN-2017, entry version 45.
DE   SubName: Full=GntR-family transcriptional regulator {ECO:0000313|EMBL:BAI94886.1};
GN   OrderedLocusNames=SJA_C1-00520 {ECO:0000313|EMBL:BAI94886.1};
OS   Sphingobium japonicum (strain NBRC 101211 / UT26S).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=452662 {ECO:0000313|EMBL:BAI94886.1, ECO:0000313|Proteomes:UP000007753};
RN   [1] {ECO:0000313|EMBL:BAI94886.1, ECO:0000313|Proteomes:UP000007753}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 101211 / UT26S {ECO:0000313|Proteomes:UP000007753};
RX   PubMed=20817768; DOI=10.1128/JB.00961-10;
RA   Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A.,
RA   Fukui S., Fujita N., Tsuda M.;
RT   "Complete genome sequence of the representative gamma-
RT   hexachlorocyclohexane-degrading bacterium Sphingobium japonicum
RT   UT26.";
RL   J. Bacteriol. 192:5852-5853(2010).
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DR   EMBL; AP010803; BAI94886.1; -; Genomic_DNA.
DR   RefSeq; WP_007689269.1; NC_014006.1.
DR   ProteinModelPortal; D4YX04; -.
DR   STRING; 452662.SJA_C1-00520; -.
DR   EnsemblBacteria; BAI94886; BAI94886; SJA_C1-00520.
DR   GeneID; 29271761; -.
DR   KEGG; sjp:SJA_C1-00520; -.
DR   eggNOG; ENOG4105CY6; Bacteria.
DR   eggNOG; COG1167; LUCA.
DR   HOGENOM; HOG000223043; -.
DR   OMA; LSFWVEL; -.
DR   OrthoDB; POG091H00F9; -.
DR   BioCyc; SJAP452662:GHEL-52-MONOMER; -.
DR   Proteomes; UP000007753; Chromosome 1.
DR   GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   CDD; cd07377; WHTH_GntR; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   Gene3D; 3.40.640.10; -; 1.
DR   Gene3D; 3.90.1150.10; -; 1.
DR   InterPro; IPR004839; Aminotransferase_I/II.
DR   InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR   InterPro; IPR015421; PyrdxlP-dep_Trfase_major_sub1.
DR   InterPro; IPR015422; PyrdxlP-dep_Trfase_sub2.
DR   InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF00155; Aminotran_1_2; 1.
DR   Pfam; PF00392; GntR; 1.
DR   PRINTS; PR00035; HTHGNTR.
DR   SMART; SM00345; HTH_GNTR; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   SUPFAM; SSF53383; SSF53383; 1.
DR   PROSITE; PS50949; HTH_GNTR; 1.
PE   4: Predicted;
DR   PRODOM; D4YX04.
DR   SWISS-2DPAGE; D4YX04.
KW   Complete proteome {ECO:0000313|Proteomes:UP000007753};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00307,
KW   ECO:0000256|SAAS:SAAS00145206};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007753};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00307,
KW   ECO:0000256|SAAS:SAAS00145490};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00307,
KW   ECO:0000256|SAAS:SAAS00145675}.
FT   DOMAIN       25     93       HTH gntR-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS50949}.
FT   DNA_BIND     53     72       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00307}.
SQ   SEQUENCE   487 AA;  52346 MW;  4445ABAA1A53ED85 CRC64;
     MSTSLLRPPS LLRLLGAWRA EDSAEPAYRQ LAQALRMLVL DGRVGLNVRL PGERELAAAL
     GLSRTTIAAA FDRLRDEGFL ESRQGSGSVT RLPPGRMDQA LPEIDTIGGG NILNWTHAAL
     PAAPGVGRAY QAAVEALPAF LGELGYDPLG LPPLRRAIAA YYERRGCPTS PDQIIVTNGA
     QQGFSLLLHW LAGPGDRAVI DHPTYHNAIQ ALQRAHVVPV PVGLPAQGWD IDAMEAAFRQ
     TSPRFAYIIA DFHNPTGRSM DPGTRRALVA AATRSHMPLI IDETMAAMGL DNMPPPPVAV
     HDPSGRQVIT LGSASKIFWG GLRVGWIRAD PQTVAALGRL RTTMDMASPV VEQLAVAHLI
     DGDEGLGPRA AMLRGRRDHL LALIERHLPH WRAESPAGGL SLWAELPRGE ATALAAIAES
     HGVRVAPGPR FGVSGAFERF LRLPFTLSEE QLTAGVERLA EADARLHARL PRARDSVAAA
     LEADRLI
//

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