(data stored in SCRATCH zone)

SWISSPROT: D4YX24_SPHJU

ID   D4YX24_SPHJU            Unreviewed;       538 AA.
AC   D4YX24;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   07-JUN-2017, entry version 40.
DE   SubName: Full=Putative amino acid transporter {ECO:0000313|EMBL:BAI94906.1};
GN   OrderedLocusNames=SJA_C1-00720 {ECO:0000313|EMBL:BAI94906.1};
OS   Sphingobium japonicum (strain NBRC 101211 / UT26S).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=452662 {ECO:0000313|EMBL:BAI94906.1, ECO:0000313|Proteomes:UP000007753};
RN   [1] {ECO:0000313|EMBL:BAI94906.1, ECO:0000313|Proteomes:UP000007753}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 101211 / UT26S {ECO:0000313|Proteomes:UP000007753};
RX   PubMed=20817768; DOI=10.1128/JB.00961-10;
RA   Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A.,
RA   Fukui S., Fujita N., Tsuda M.;
RT   "Complete genome sequence of the representative gamma-
RT   hexachlorocyclohexane-degrading bacterium Sphingobium japonicum
RT   UT26.";
RL   J. Bacteriol. 192:5852-5853(2010).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; AP010803; BAI94906.1; -; Genomic_DNA.
DR   RefSeq; WP_013038740.1; NC_014006.1.
DR   STRING; 452662.SJA_C1-00720; -.
DR   EnsemblBacteria; BAI94906; BAI94906; SJA_C1-00720.
DR   GeneID; 29271785; -.
DR   KEGG; sjp:SJA_C1-00720; -.
DR   eggNOG; ENOG4105CUB; Bacteria.
DR   eggNOG; COG0531; LUCA.
DR   HOGENOM; HOG000250622; -.
DR   KO; K03294; -.
DR   OMA; CLMAISM; -.
DR   OrthoDB; POG091H0FFW; -.
DR   BioCyc; SJAP452662:GHEL-78-MONOMER; -.
DR   Proteomes; UP000007753; Chromosome 1.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0015171; F:amino acid transmembrane transporter activity; IEA:InterPro.
DR   InterPro; IPR002293; AA/rel_permease1.
DR   Pfam; PF13520; AA_permease_2; 1.
DR   PIRSF; PIRSF006060; AA_transporter; 1.
PE   4: Predicted;
DR   PRODOM; D4YX24.
DR   SWISS-2DPAGE; D4YX24.
KW   Complete proteome {ECO:0000313|Proteomes:UP000007753};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007753};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     28     51       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     57     79       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    100    124       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    161    182       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    194    214       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    234    252       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    273    297       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    357    378       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    399    417       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    423    444       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    456    476       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    482    500       Helical. {ECO:0000256|SAM:Phobius}.
SQ   SEQUENCE   538 AA;  55820 MW;  F5F8B7A8036B8FD8 CRC64;
     MIFGRIKPLD AILATAEKKS LVRTLGPVQL TLLGVGAIIG TGIFVLTAAA AQKAGPGMMW
     SFVIAGAVCA FAALCYSEIA SMVPVSGSAY TYTYAVVGEL LAWMVGWALI LEYAVAASAV
     SVGWSGYFMG LLKSITGLEL PQALSAGPVW TMNGLVPHAD ITHGLINIPA IVIALAVTAL
     LVIGTTESAR VNAVLVAIKV TALTAFILLT LPVLDTGNFS PFAPNGWFGP EGASGMGIVG
     AAASIFFAYV GFDAVSTAAE ETKNPQRNVP IGLIGSLALC TVFYLLVAGG AIGAIGAQPV
     LGPDGSVVAP GSQGFAAACA TAAHAQDLVC SNEALAHVLR EINWTVVGNA LGLAANLALP
     SVILMMMFGQ TRIFFVMARD GLLPEKLASI HPRFKTPHVV TMVTGVFVAI GAALLPVGQL
     ADISNSGTLF AFFMVSIAVL VLRVKEPGRA RPFRTPLVWV IAPMAAFGCV FLFFNLPFDA
     QLVLPIWGGI GLVLYFIYGY RKSHVGRGLV ETHEQDAGIP PQPVPPMPGA HTPGGRDA
//

If you have problems or comments...

PBIL Back to PBIL home page