(data stored in SCRATCH zone)

SWISSPROT: D4YXF6_SPHJU

ID   D4YXF6_SPHJU            Unreviewed;       451 AA.
AC   D4YXF6;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   07-JUN-2017, entry version 37.
DE   SubName: Full=MFS transporter, putative metabolite:H+ symporter {ECO:0000313|EMBL:BAI95038.1};
GN   Name=ydjE {ECO:0000313|EMBL:BAI95038.1};
GN   OrderedLocusNames=SJA_C1-02040 {ECO:0000313|EMBL:BAI95038.1};
OS   Sphingobium japonicum (strain NBRC 101211 / UT26S).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=452662 {ECO:0000313|EMBL:BAI95038.1, ECO:0000313|Proteomes:UP000007753};
RN   [1] {ECO:0000313|EMBL:BAI95038.1, ECO:0000313|Proteomes:UP000007753}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 101211 / UT26S {ECO:0000313|Proteomes:UP000007753};
RX   PubMed=20817768; DOI=10.1128/JB.00961-10;
RA   Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A.,
RA   Fukui S., Fujita N., Tsuda M.;
RT   "Complete genome sequence of the representative gamma-
RT   hexachlorocyclohexane-degrading bacterium Sphingobium japonicum
RT   UT26.";
RL   J. Bacteriol. 192:5852-5853(2010).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; AP010803; BAI95038.1; -; Genomic_DNA.
DR   RefSeq; WP_013038843.1; NC_014006.1.
DR   ProteinModelPortal; D4YXF6; -.
DR   STRING; 452662.SJA_C1-02040; -.
DR   EnsemblBacteria; BAI95038; BAI95038; SJA_C1-02040.
DR   GeneID; 29271908; -.
DR   KEGG; sjp:SJA_C1-02040; -.
DR   eggNOG; ENOG4105D2S; Bacteria.
DR   eggNOG; COG0477; LUCA.
DR   HOGENOM; HOG000114541; -.
DR   OMA; LMEWTAA; -.
DR   OrthoDB; POG091H022Q; -.
DR   Proteomes; UP000007753; Chromosome 1.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005215; F:transporter activity; IEA:InterPro.
DR   GO; GO:0055085; P:transmembrane transport; IEA:InterPro.
DR   CDD; cd06174; MFS; 1.
DR   InterPro; IPR011701; MFS.
DR   InterPro; IPR020846; MFS_dom.
DR   InterPro; IPR005829; Sugar_transporter_CS.
DR   Pfam; PF07690; MFS_1; 1.
DR   SUPFAM; SSF103473; SSF103473; 1.
DR   PROSITE; PS50850; MFS; 1.
DR   PROSITE; PS00216; SUGAR_TRANSPORT_1; 1.
PE   4: Predicted;
DR   PRODOM; D4YXF6.
DR   SWISS-2DPAGE; D4YXF6.
KW   Complete proteome {ECO:0000313|Proteomes:UP000007753};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007753};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     12     33       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     60     82       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     89    109       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    115    135       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    147    173       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    179    198       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    259    278       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    290    311       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    323    341       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    347    369       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    381    406       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    412    431       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN       24    436       MFS. {ECO:0000259|PROSITE:PS50850}.
SQ   SEQUENCE   451 AA;  46604 MW;  2136213423437BAD CRC64;
     MANSSVKVRP LLADAPLSAF QIAVVALCVL INICDGLDTT ATAYAAPAIL KDWRLAPQTM
     GLILSAGAAG LMLGAILIAP LADRFGRRPI VLAAATTSAV AMIAISASTN WETLLLFRFL
     AGLAIGALVP SLSVIVVEFS NETRGNFFLA CVHIGFAIGA MIGAAIGAAL LGAHGWRSIY
     LVAGLITGAV AVAAFVLLPE SLHFLLNRQP ANALARANAI LRRLKQPELA ALPPVPERPS
     RSPLAIGAIL SGPLRSATLF LWLASFMRYF VSYFLTSWKP QVLVLAGFKG QAAVAVGMAT
     SFAAILGVLA IGTLAARLGS RRATAGALLL CAVGLMGFAW VSSPVTLILF AMLSMFSIEA
     AFTGMLITSN RLYPDHARST GVGLAVGMGR VGAIAGPYAG GVLIGLGLDK SAYYPLYAVA
     ALIGAGAILL ARARGQETAD DRVARQLSGA R
//

If you have problems or comments...

PBIL Back to PBIL home page