(data stored in SCRATCH zone)

SWISSPROT: D4YXI8_SPHJU

ID   D4YXI8_SPHJU            Unreviewed;       706 AA.
AC   D4YXI8;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   08-MAY-2019, entry version 47.
DE   SubName: Full=Acyl-CoA synthetase (NDP forming) {ECO:0000313|EMBL:BAI95070.1};
GN   OrderedLocusNames=SJA_C1-02360 {ECO:0000313|EMBL:BAI95070.1};
OS   Sphingobium japonicum (strain DSM 16413 / CCM 7287 / MTCC 6362 / UT26
OS   / NBRC 101211 / UT26S).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=452662 {ECO:0000313|EMBL:BAI95070.1, ECO:0000313|Proteomes:UP000007753};
RN   [1] {ECO:0000313|EMBL:BAI95070.1, ECO:0000313|Proteomes:UP000007753}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 16413 / CCM 7287 / MTCC 6362 / UT26 / NBRC 101211 / UT26S
RC   {ECO:0000313|Proteomes:UP000007753};
RX   PubMed=20817768; DOI=10.1128/JB.00961-10;
RA   Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A.,
RA   Fukui S., Fujita N., Tsuda M.;
RT   "Complete genome sequence of the representative gamma-
RT   hexachlorocyclohexane-degrading bacterium Sphingobium japonicum
RT   UT26.";
RL   J. Bacteriol. 192:5852-5853(2010).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; AP010803; BAI95070.1; -; Genomic_DNA.
DR   RefSeq; WP_013038874.1; NC_014006.1.
DR   STRING; 452662.SJA_C1-02360; -.
DR   EnsemblBacteria; BAI95070; BAI95070; SJA_C1-02360.
DR   GeneID; 29271939; -.
DR   KEGG; sjp:SJA_C1-02360; -.
DR   eggNOG; ENOG4105CD5; Bacteria.
DR   eggNOG; COG1042; LUCA.
DR   HOGENOM; HOG000220089; -.
DR   OMA; ADRMYDA; -.
DR   BioCyc; SJAP452662:GHEL-244-MONOMER; -.
DR   Proteomes; UP000007753; Chromosome 1.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0048037; F:cofactor binding; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:InterPro.
DR   Gene3D; 3.30.1490.20; -; 1.
DR   Gene3D; 3.40.50.261; -; 2.
DR   InterPro; IPR011761; ATP-grasp.
DR   InterPro; IPR013815; ATP_grasp_subdomain_1.
DR   InterPro; IPR003781; CoA-bd.
DR   InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR   InterPro; IPR032875; Succ_CoA_lig_flav_dom.
DR   InterPro; IPR016102; Succinyl-CoA_synth-like.
DR   Pfam; PF13380; CoA_binding_2; 1.
DR   Pfam; PF13607; Succ_CoA_lig; 1.
DR   SMART; SM00881; CoA_binding; 1.
DR   SUPFAM; SSF51735; SSF51735; 1.
DR   SUPFAM; SSF52210; SSF52210; 2.
DR   PROSITE; PS50975; ATP_GRASP; 1.
PE   4: Predicted;
DR   PRODOM; D4YXI8.
DR   SWISS-2DPAGE; D4YXI8.
KW   ATP-binding {ECO:0000256|PROSITE-ProRule:PRU00409};
KW   Complete proteome {ECO:0000313|Proteomes:UP000007753};
KW   Nucleotide-binding {ECO:0000256|PROSITE-ProRule:PRU00409};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007753}.
FT   DOMAIN      498    535       ATP-grasp. {ECO:0000259|PROSITE:PS50975}.
SQ   SEQUENCE   706 AA;  73379 MW;  C6AF98A8E67219D5 CRC64;
     MTNDVLGRTS AGALNLERLL RPRSVAIVGA SANPGSTGRR VLANLERFSF SGEIHLVSRQ
     GGEIAGRTSV TDIAALPMGV DLAVLAVPGT GVRDAVAQCV ARGIGAAVVY ASGFAEMGPE
     GRREQEEIAR IAREGGLALV GPNCIGLTSF VDGTPLSFGI QQPAVINDPA VAILGQSGGM
     VGNIRLSCTA RALPVSYTIS TGNEAVLTIN DFVAHIIDDT VTRVIAIFAE QLRDPQRFLA
     LARDAFAAGK RIVLIHPGRS IRAQEAAASH TGSLATDHAV MQTLVTSAGV ILVNGLDELT
     DVVELLLRTP DLPQEGPAIL TESGAFKGLA ADICADLGLD LPDLSVKTGE RLACILPAFA
     HISNPLDVTA QGLQQLDIYG HAVSALLADP AVGSVILVLM PGSPEFGLKV VEEILPSIAG
     AAKPVIYTLL GDNSPIAPEI AGRLREAGIA FFRSPERALR AVARLWSAAR TRPLAPRDDG
     IVIDLPATTG VLPEHRGKAL LREAGLPIPT GRLAVSAADA ALAASEIDGP VALKAQSAVL
     THKSDLGGVS LNLSDEASVL AAFATQTAAI AKHRPDVVLD GVLVEAMAPK GHELVVSVRR
     DTDWGPVMMV GLGGVWIEAL HDVAMLSPDS DRQDVLRALN GLKGGSILRG WRGEPAADLE
     AVVDTVIQLG RIIRGNPRIE EIEINPLSVR DAGQGATVLD ALVTLS
//

If you have problems or comments...

PBIL Back to PBIL home page