(data stored in SCRATCH zone)

SWISSPROT: D4YY14_SPHJU

ID   D4YY14_SPHJU            Unreviewed;       506 AA.
AC   D4YY14;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   07-JUN-2017, entry version 45.
DE   SubName: Full=Putative nucleotidyltransferase {ECO:0000313|EMBL:BAI95246.1};
GN   OrderedLocusNames=SJA_C1-04120 {ECO:0000313|EMBL:BAI95246.1};
OS   Sphingobium japonicum (strain NBRC 101211 / UT26S).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=452662 {ECO:0000313|EMBL:BAI95246.1, ECO:0000313|Proteomes:UP000007753};
RN   [1] {ECO:0000313|EMBL:BAI95246.1, ECO:0000313|Proteomes:UP000007753}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 101211 / UT26S {ECO:0000313|Proteomes:UP000007753};
RX   PubMed=20817768; DOI=10.1128/JB.00961-10;
RA   Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A.,
RA   Fukui S., Fujita N., Tsuda M.;
RT   "Complete genome sequence of the representative gamma-
RT   hexachlorocyclohexane-degrading bacterium Sphingobium japonicum
RT   UT26.";
RL   J. Bacteriol. 192:5852-5853(2010).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; AP010803; BAI95246.1; -; Genomic_DNA.
DR   RefSeq; WP_013039026.1; NC_014006.1.
DR   STRING; 452662.SJA_C1-04120; -.
DR   EnsemblBacteria; BAI95246; BAI95246; SJA_C1-04120.
DR   GeneID; 29272098; -.
DR   KEGG; sjp:SJA_C1-04120; -.
DR   eggNOG; ENOG4107F83; Bacteria.
DR   eggNOG; COG0389; LUCA.
DR   HOGENOM; HOG000146408; -.
DR   KO; K14161; -.
DR   OMA; GRWWLHG; -.
DR   OrthoDB; POG091H09FE; -.
DR   BioCyc; SJAP452662:GHEL-423-MONOMER; -.
DR   Proteomes; UP000007753; Chromosome 1.
DR   GO; GO:0003684; F:damaged DNA binding; IEA:InterPro.
DR   GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   Gene3D; 3.30.1490.100; -; 1.
DR   InterPro; IPR017961; DNA_pol_Y-fam_little_finger.
DR   InterPro; IPR001126; UmuC.
DR   Pfam; PF00817; IMS; 1.
DR   PROSITE; PS50173; UMUC; 1.
PE   4: Predicted;
DR   PRODOM; D4YY14.
DR   SWISS-2DPAGE; D4YY14.
KW   Complete proteome {ECO:0000313|Proteomes:UP000007753};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007753};
KW   Transferase {ECO:0000313|EMBL:BAI95246.1}.
FT   DOMAIN       31    158       UmuC. {ECO:0000259|PROSITE:PS50173}.
SQ   SEQUENCE   506 AA;  55045 MW;  33F2E76350867F2B CRC64;
     MTRVVSLFLP SWSTDRLRRK AGDAAHPAEA PLVLIGRDGN RRVVLAADAA AQGAGLRAGM
     PVTKAQVLVP GLIVQDADPD GDAEALDRLA AWLLRYAPIV APDPPDGIII DSTGADHLHG
     GEGAMLKGLI GRLAMSGLTA RAAIADTWGA AHALARYAAR PTRIAPPGHG RSILDPLPLT
     ALRIAPSTVE GLRTLGFQCI GDLLAQPRAP LTLRFGPEID RRIDHALGDL AEPIEPVRPS
     ELVQVRRAFA EPIGTAETIA RYIGKLVVQL CALLEERGLG ARRLDLLCHR VDNRAQAVRV
     GMATPVRDVR RLTRLLCDKI ETISPGFGIE VMTLRASDAE PLERKQAVSS LVEEAAPDVS
     DLIDTLMNRV GERAIYRLAP VASDVPERSV CRIPAMAADT GTSWPGHWPR PSRLLTQPEP
     VETVALLPDH PPVSFTWRGV HRRVKRADGP ERVFGEWWKR DAELAAVRDY FRVEDEAGER
     YWLYRAGDGE DATTGSHHWF LHGVFG
//

If you have problems or comments...

PBIL Back to PBIL home page