(data stored in SCRATCH zone)

SWISSPROT: D4YY22_SPHJU

ID   D4YY22_SPHJU            Unreviewed;       741 AA.
AC   D4YY22;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   11-DEC-2019, entry version 43.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAI95254.1};
GN   OrderedLocusNames=SJA_C1-04200 {ECO:0000313|EMBL:BAI95254.1},
GN   SJA_C1-29920 {ECO:0000313|EMBL:BAI97826.1}, SJA_P1-02160
GN   {ECO:0000313|EMBL:BAI99168.1};
OS   Sphingobium japonicum (strain DSM 16413 / CCM 7287 / MTCC 6362 / UT26 /
OS   NBRC 101211 / UT26S).
OG   Plasmid pCHQ1 {ECO:0000313|EMBL:BAI99168.1,
OG   ECO:0000313|Proteomes:UP000007753}.
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=452662 {ECO:0000313|EMBL:BAI95254.1, ECO:0000313|Proteomes:UP000007753};
RN   [1] {ECO:0000313|EMBL:BAI95254.1, ECO:0000313|Proteomes:UP000007753}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 16413 / CCM 7287 / MTCC 6362 / UT26 / NBRC 101211 / UT26S
RC   {ECO:0000313|Proteomes:UP000007753}, and UT26S
RC   {ECO:0000313|EMBL:BAI95254.1};
RC   PLASMID=pCHQ1 {ECO:0000313|EMBL:BAI99168.1,
RC   ECO:0000313|Proteomes:UP000007753};
RX   PubMed=20817768; DOI=10.1128/JB.00961-10;
RA   Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A., Fukui S.,
RA   Fujita N., Tsuda M.;
RT   "Complete genome sequence of the representative gamma-
RT   hexachlorocyclohexane-degrading bacterium Sphingobium japonicum UT26.";
RL   J. Bacteriol. 192:5852-5853(2010).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AP010803; BAI95254.1; -; Genomic_DNA.
DR   EMBL; AP010803; BAI97826.1; -; Genomic_DNA.
DR   EMBL; AP010805; BAI99168.1; -; Genomic_DNA.
DR   RefSeq; WP_013039034.1; NC_014007.1.
DR   STRING; 452662.SJA_C1-29920; -.
DR   EnsemblBacteria; BAI95254; BAI95254; SJA_C1-04200.
DR   EnsemblBacteria; BAI97826; BAI97826; SJA_C1-29920.
DR   EnsemblBacteria; BAI99168; BAI99168; SJA_P1-02160.
DR   GeneID; 29275765; -.
DR   KEGG; sjp:SJA_C1-04200; -.
DR   KEGG; sjp:SJA_C1-29920; -.
DR   KEGG; sjp:SJA_P1-02160; -.
DR   eggNOG; ENOG4108FTI; Bacteria.
DR   eggNOG; ENOG410ZSZB; LUCA.
DR   HOGENOM; HOG000269304; -.
DR   OMA; AWHIARR; -.
DR   BioCyc; SJAP452662:GHEL-431-MONOMER; -.
DR   Proteomes; UP000007753; Chromosome 1.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR   Gene3D; 1.10.443.10; -; 1.
DR   InterPro; IPR011010; DNA_brk_join_enz.
DR   InterPro; IPR013762; Integrase-like_cat_sf.
DR   SUPFAM; SSF56349; SSF56349; 1.
PE   4: Predicted;
DR   PRODOM; D4YY22.
DR   SWISS-2DPAGE; D4YY22.
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   DNA recombination {ECO:0000256|SAAS:SAAS01225217};
KW   Plasmid {ECO:0000313|EMBL:BAI99168.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007753}.
FT   REGION          720..741
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          219..239
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   741 AA;  81138 MW;  C423904E41AACDE0 CRC64;
     MTVVQLLAES DDERDALPVL MSAPLRPGCD RAHISRYGDP VWDLAPGVFR DNARRCHVTV
     HFGGIKDPSI ADALRQILHA RLNVDLPGHR SRLEPAGVRG EANRTLRFFD FVKAQLGRFD
     LARVDQALVD RYAGALRLAG LRPVAAAALL RIVFDLHELQ HHLPTARLSF EPWPGRSPFS
     VAGAKHIAGE NRTPRIPEAI MTPLLSWSLR YVTCYAGDIL AARAELDCLE ATRNRLIAAE
     EGLDPAVRRL RQRQRLLDYV ASLRQHGRGI PIWTTAHNGA TRTDPQTGAV TPPINYHLIH
     LHAGINAQAE PAMHLGLATG APDLIAAAIA ELGTEIGGMD TPNSADPDTG MPWRTRFDAK
     VLPLEEVMLQ SAAYIVCAFL SGMRDSEIQA MRRGCLSITK AEDGTILRHR IKSTAYKGKR
     GGGEETEWVT IAPVAEAIDV LERLSARAGQ ARGTTTLWPV LTLRANTKTH VSAEIVRQLN
     RFRDHLNDHF GSAQAPVIPA GPDGRPWRLT TRQFRRTIAW HIANRPFGTI AGMIQYKHAS
     VAAFEGYAGS SRSGFRGEIE AQRALGQIDD ILVYFDERQS GARLGGPAAN RVGVVLDTAA
     HELAPLPAMI ADRPRLRTML GSLARTLHVG PLADCFFDPA TALCLNRSSE PGASGPMISM
     CEPVRCPNAC IAERHRPAWQ RGADEARLLL REKRLPEPQR VTLQAEVARI QRVLEQIAPG
     TATPHNGMAG EEEEAGLRVT D
//

If you have problems or comments...

PBIL Back to PBIL home page