(data stored in SCRATCH zone)

SWISSPROT: D4YY65_SPHJU

ID   D4YY65_SPHJU            Unreviewed;       314 AA.
AC   D4YY65;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   07-JUN-2017, entry version 33.
DE   SubName: Full=Type IV secretory pathway VirB6 component {ECO:0000313|EMBL:BAI95297.1};
GN   Name=virB6 {ECO:0000313|EMBL:BAI95297.1};
GN   Synonyms=trbL {ECO:0000313|EMBL:BAI95297.1};
GN   OrderedLocusNames=SJA_C1-04630 {ECO:0000313|EMBL:BAI95297.1};
OS   Sphingobium japonicum (strain NBRC 101211 / UT26S).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=452662 {ECO:0000313|EMBL:BAI95297.1, ECO:0000313|Proteomes:UP000007753};
RN   [1] {ECO:0000313|EMBL:BAI95297.1, ECO:0000313|Proteomes:UP000007753}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 101211 / UT26S {ECO:0000313|Proteomes:UP000007753};
RX   PubMed=20817768; DOI=10.1128/JB.00961-10;
RA   Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A.,
RA   Fukui S., Fujita N., Tsuda M.;
RT   "Complete genome sequence of the representative gamma-
RT   hexachlorocyclohexane-degrading bacterium Sphingobium japonicum
RT   UT26.";
RL   J. Bacteriol. 192:5852-5853(2010).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; AP010803; BAI95297.1; -; Genomic_DNA.
DR   RefSeq; WP_013039067.1; NC_014006.1.
DR   STRING; 452662.SJA_C1-04630; -.
DR   EnsemblBacteria; BAI95297; BAI95297; SJA_C1-04630.
DR   GeneID; 29272145; -.
DR   KEGG; sjp:SJA_C1-04630; -.
DR   eggNOG; ENOG4107PB5; Bacteria.
DR   eggNOG; COG3704; LUCA.
DR   HOGENOM; HOG000288665; -.
DR   KO; K03201; -.
DR   OMA; MFAQVAL; -.
DR   OrthoDB; POG091H0ND6; -.
DR   Proteomes; UP000007753; Chromosome 1.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0030255; P:protein secretion by the type IV secretion system; IEA:InterPro.
DR   InterPro; IPR007688; Conjugal_tfr_TrbL/VirB6.
DR   Pfam; PF04610; TrbL; 1.
PE   4: Predicted;
DR   PRODOM; D4YY65.
DR   SWISS-2DPAGE; D4YY65.
KW   Complete proteome {ECO:0000313|Proteomes:UP000007753};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007753};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     31     51       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     63     82       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    143    165       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    172    190       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    205    227       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    239    259       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    265    289       Helical. {ECO:0000256|SAM:Phobius}.
SQ   SEQUENCE   314 AA;  33630 MW;  17496556EB97CA01 CRC64;
     MATDMFNSLY ANVDGKLDLF LNERLQNVVE VVRGPLAVGL VIYIALFGYM VMRGIISEPW
     GELFYRMVKL CLLYVAATTV AYSDWITTPL FHGMPDAISQ ALAGKTIDTV GEAFDDYYTQ
     SDAIVARIET EAATYSDINP YKLVLYALSL GLKALVGLSA AVGFAITIFA KVALAIIIAL
     GPIFIALALF EPTRRFFHGW LGQVFNYIVL LAVIIAITTL ITDLGAAATA ASEGVVDTAF
     GAVLFAAYIF LGTIFFFQAP AIATGIAGGA AAGVGAFAGT AWGTMASPFR QRRVMRNSRN
     LERAARRGGT IESA
//

If you have problems or comments...

PBIL Back to PBIL home page