(data stored in SCRATCH zone)

SWISSPROT: D4YYI2_SPHJU

ID   D4YYI2_SPHJU            Unreviewed;       129 AA.
AC   D4YYI2;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   07-JUN-2017, entry version 42.
DE   RecName: Full=30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310};
GN   Name=rpsK {ECO:0000256|HAMAP-Rule:MF_01310,
GN   ECO:0000313|EMBL:BAI95414.1};
GN   OrderedLocusNames=SJA_C1-05800 {ECO:0000313|EMBL:BAI95414.1};
OS   Sphingobium japonicum (strain NBRC 101211 / UT26S).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=452662 {ECO:0000313|EMBL:BAI95414.1, ECO:0000313|Proteomes:UP000007753};
RN   [1] {ECO:0000313|EMBL:BAI95414.1, ECO:0000313|Proteomes:UP000007753}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 101211 / UT26S {ECO:0000313|Proteomes:UP000007753};
RX   PubMed=20817768; DOI=10.1128/JB.00961-10;
RA   Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A.,
RA   Fukui S., Fujita N., Tsuda M.;
RT   "Complete genome sequence of the representative gamma-
RT   hexachlorocyclohexane-degrading bacterium Sphingobium japonicum
RT   UT26.";
RL   J. Bacteriol. 192:5852-5853(2010).
CC   -!- FUNCTION: Located on the platform of the 30S subunit, it bridges
CC       several disparate RNA helices of the 16S rRNA. Forms part of the
CC       Shine-Dalgarno cleft in the 70S ribosome. {ECO:0000256|HAMAP-
CC       Rule:MF_01310}.
CC   -!- SUBUNIT: Part of the 30S ribosomal subunit. Interacts with
CC       proteins S7 and S18. Binds to IF-3. {ECO:0000256|HAMAP-
CC       Rule:MF_01310}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uS11
CC       family. {ECO:0000256|HAMAP-Rule:MF_01310,
CC       ECO:0000256|RuleBase:RU003629}.
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DR   EMBL; AP010803; BAI95414.1; -; Genomic_DNA.
DR   RefSeq; WP_004208752.1; NC_014006.1.
DR   ProteinModelPortal; D4YYI2; -.
DR   STRING; 452662.SJA_C1-05800; -.
DR   EnsemblBacteria; BAI95414; BAI95414; SJA_C1-05800.
DR   GeneID; 31532627; -.
DR   KEGG; sjp:SJA_C1-05800; -.
DR   eggNOG; ENOG4108UHH; Bacteria.
DR   eggNOG; COG0100; LUCA.
DR   HOGENOM; HOG000111597; -.
DR   KO; K02948; -.
DR   OMA; KVYVKGP; -.
DR   OrthoDB; POG091H00C0; -.
DR   Proteomes; UP000007753; Chromosome 1.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-HAMAP.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-HAMAP.
DR   Gene3D; 3.30.420.80; -; 1.
DR   HAMAP; MF_01310; Ribosomal_S11; 1.
DR   InterPro; IPR001971; Ribosomal_S11.
DR   InterPro; IPR019981; Ribosomal_S11_bac-type.
DR   InterPro; IPR018102; Ribosomal_S11_CS.
DR   PANTHER; PTHR11759; PTHR11759; 1.
DR   Pfam; PF00411; Ribosomal_S11; 1.
DR   PIRSF; PIRSF002131; Ribosomal_S11; 1.
DR   TIGRFAMs; TIGR03632; uS11_bact; 1.
DR   PROSITE; PS00054; RIBOSOMAL_S11; 1.
PE   3: Inferred from homology;
DR   PRODOM; D4YYI2.
DR   SWISS-2DPAGE; D4YYI2.
KW   Complete proteome {ECO:0000313|Proteomes:UP000007753};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007753};
KW   Ribonucleoprotein {ECO:0000256|HAMAP-Rule:MF_01310,
KW   ECO:0000256|RuleBase:RU003629};
KW   Ribosomal protein {ECO:0000256|HAMAP-Rule:MF_01310,
KW   ECO:0000256|RuleBase:RU003629, ECO:0000313|EMBL:BAI95414.1};
KW   RNA-binding {ECO:0000256|HAMAP-Rule:MF_01310};
KW   rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01310}.
SQ   SEQUENCE   129 AA;  13964 MW;  2FE871126E7A94E7 CRC64;
     MAREPQRIKR RERKNISAGV AHVNASFNNT MVTITDAQGN AISWSSAGMM GFKGSRKSTP
     YAAQVCAEDA GRKAAEHGVR TLEVEVKGPG SGRESALRAL QAVGFHITSI RDVTPIPHNG
     VRPSKRRRV
//

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