(data stored in SCRATCH zone)

SWISSPROT: D4YYN5_SPHJU

ID   D4YYN5_SPHJU            Unreviewed;       231 AA.
AC   D4YYN5;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   07-JUN-2017, entry version 46.
DE   RecName: Full=30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309};
GN   Name=rpsC {ECO:0000256|HAMAP-Rule:MF_01309,
GN   ECO:0000313|EMBL:BAI95467.1};
GN   OrderedLocusNames=SJA_C1-06330 {ECO:0000313|EMBL:BAI95467.1};
OS   Sphingobium japonicum (strain NBRC 101211 / UT26S).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=452662 {ECO:0000313|EMBL:BAI95467.1, ECO:0000313|Proteomes:UP000007753};
RN   [1] {ECO:0000313|EMBL:BAI95467.1, ECO:0000313|Proteomes:UP000007753}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 101211 / UT26S {ECO:0000313|Proteomes:UP000007753};
RX   PubMed=20817768; DOI=10.1128/JB.00961-10;
RA   Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A.,
RA   Fukui S., Fujita N., Tsuda M.;
RT   "Complete genome sequence of the representative gamma-
RT   hexachlorocyclohexane-degrading bacterium Sphingobium japonicum
RT   UT26.";
RL   J. Bacteriol. 192:5852-5853(2010).
CC   -!- FUNCTION: Binds the lower part of the 30S subunit head. Binds mRNA
CC       in the 70S ribosome, positioning it for translation.
CC       {ECO:0000256|HAMAP-Rule:MF_01309}.
CC   -!- SUBUNIT: Part of the 30S ribosomal subunit. Forms a tight complex
CC       with proteins S10 and S14. {ECO:0000256|HAMAP-Rule:MF_01309}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uS3 family.
CC       {ECO:0000256|HAMAP-Rule:MF_01309, ECO:0000256|RuleBase:RU003624}.
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DR   EMBL; AP010803; BAI95467.1; -; Genomic_DNA.
DR   RefSeq; WP_013039175.1; NC_014006.1.
DR   STRING; 452662.SJA_C1-06330; -.
DR   EnsemblBacteria; BAI95467; BAI95467; SJA_C1-06330.
DR   GeneID; 29272306; -.
DR   KEGG; sjp:SJA_C1-06330; -.
DR   eggNOG; ENOG4105CKE; Bacteria.
DR   eggNOG; COG0092; LUCA.
DR   HOGENOM; HOG000210610; -.
DR   KO; K02982; -.
DR   OMA; KTNPIGN; -.
DR   OrthoDB; POG091H00OD; -.
DR   Proteomes; UP000007753; Chromosome 1.
DR   GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR   GO; GO:0003729; F:mRNA binding; IEA:UniProtKB-HAMAP.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-HAMAP.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-HAMAP.
DR   Gene3D; 3.30.300.20; -; 1.
DR   HAMAP; MF_01309_B; Ribosomal_S3_B; 1.
DR   InterPro; IPR004087; KH_dom.
DR   InterPro; IPR015946; KH_dom-like_a/b.
DR   InterPro; IPR004044; KH_dom_type_2.
DR   InterPro; IPR009019; KH_prok-type.
DR   InterPro; IPR005704; Ribosomal_S3_bac.
DR   InterPro; IPR001351; Ribosomal_S3_C.
DR   InterPro; IPR018280; Ribosomal_S3_CS.
DR   PANTHER; PTHR11760:SF29; PTHR11760:SF29; 1.
DR   Pfam; PF07650; KH_2; 1.
DR   Pfam; PF00189; Ribosomal_S3_C; 1.
DR   SMART; SM00322; KH; 1.
DR   SUPFAM; SSF54814; SSF54814; 1.
DR   SUPFAM; SSF54821; SSF54821; 1.
DR   TIGRFAMs; TIGR01009; rpsC_bact; 1.
DR   PROSITE; PS50823; KH_TYPE_2; 1.
DR   PROSITE; PS00548; RIBOSOMAL_S3; 1.
PE   3: Inferred from homology;
DR   PRODOM; D4YYN5.
DR   SWISS-2DPAGE; D4YYN5.
KW   Complete proteome {ECO:0000313|Proteomes:UP000007753};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007753};
KW   Ribonucleoprotein {ECO:0000256|HAMAP-Rule:MF_01309,
KW   ECO:0000256|RuleBase:RU003624};
KW   Ribosomal protein {ECO:0000256|HAMAP-Rule:MF_01309,
KW   ECO:0000256|RuleBase:RU003624, ECO:0000313|EMBL:BAI95467.1};
KW   RNA-binding {ECO:0000256|HAMAP-Rule:MF_01309, ECO:0000256|PROSITE-
KW   ProRule:PRU00118}; rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01309}.
FT   DOMAIN       39    107       KH type-2. {ECO:0000259|PROSITE:PS50823}.
SQ   SEQUENCE   231 AA;  25663 MW;  3B9C3610EB4B43CF CRC64;
     MGHKSNPIGL RLQINRTWDS RWFAEGADYG RLLLEDLKIR QFIMKNLPQA AISKVVIERP
     AKLCRVSIYA ARPGVIIGKK GADIEKLRKK LGGLTSSDVS LNIVEIRKPE IDSKLVAQGI
     ADQLERRVAF RRAMKRAVQS ALRLGAEGIK ITCGGRLGGA EIARVEWYRE GRVPLHTLRA
     NVDYAEAEAH TAYGVCGIKV WIFKGEILGH DPMATDRLML EAQTSGVRPA R
//

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