(data stored in SCRATCH zone)

SWISSPROT: D4YYP0_SPHJU

ID   D4YYP0_SPHJU            Unreviewed;       103 AA.
AC   D4YYP0;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   07-JUN-2017, entry version 40.
DE   RecName: Full=50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326};
GN   Name=rplX {ECO:0000256|HAMAP-Rule:MF_01326,
GN   ECO:0000313|EMBL:BAI95472.1};
GN   OrderedLocusNames=SJA_C1-06380 {ECO:0000313|EMBL:BAI95472.1};
OS   Sphingobium japonicum (strain NBRC 101211 / UT26S).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=452662 {ECO:0000313|EMBL:BAI95472.1, ECO:0000313|Proteomes:UP000007753};
RN   [1] {ECO:0000313|EMBL:BAI95472.1, ECO:0000313|Proteomes:UP000007753}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 101211 / UT26S {ECO:0000313|Proteomes:UP000007753};
RX   PubMed=20817768; DOI=10.1128/JB.00961-10;
RA   Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A.,
RA   Fukui S., Fujita N., Tsuda M.;
RT   "Complete genome sequence of the representative gamma-
RT   hexachlorocyclohexane-degrading bacterium Sphingobium japonicum
RT   UT26.";
RL   J. Bacteriol. 192:5852-5853(2010).
CC   -!- FUNCTION: One of the proteins that surrounds the polypeptide exit
CC       tunnel on the outside of the subunit. {ECO:0000256|HAMAP-
CC       Rule:MF_01326}.
CC   -!- FUNCTION: One of two assembly initiator proteins, it binds
CC       directly to the 5'-end of the 23S rRNA, where it nucleates
CC       assembly of the 50S subunit. {ECO:0000256|HAMAP-Rule:MF_01326}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000256|HAMAP-
CC       Rule:MF_01326}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL24
CC       family. {ECO:0000256|HAMAP-Rule:MF_01326,
CC       ECO:0000256|RuleBase:RU003477}.
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DR   EMBL; AP010803; BAI95472.1; -; Genomic_DNA.
DR   RefSeq; WP_007686567.1; NC_014006.1.
DR   STRING; 452662.SJA_C1-06380; -.
DR   EnsemblBacteria; BAI95472; BAI95472; SJA_C1-06380.
DR   GeneID; 29272311; -.
DR   KEGG; sjp:SJA_C1-06380; -.
DR   eggNOG; ENOG4105KAR; Bacteria.
DR   eggNOG; COG0198; LUCA.
DR   HOGENOM; HOG000039891; -.
DR   KO; K02895; -.
DR   OMA; PQGGIVE; -.
DR   OrthoDB; POG091H01PV; -.
DR   Proteomes; UP000007753; Chromosome 1.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-HAMAP.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-HAMAP.
DR   Gene3D; 2.30.30.30; -; 1.
DR   HAMAP; MF_01326_B; Ribosomal_L24_B; 1.
DR   InterPro; IPR005824; KOW.
DR   InterPro; IPR014722; Rib_L2_dom2.
DR   InterPro; IPR003256; Ribosomal_L24.
DR   InterPro; IPR005825; Ribosomal_L24/26_CS.
DR   InterPro; IPR008991; Translation_prot_SH3-like.
DR   Pfam; PF00467; KOW; 1.
DR   Pfam; PF17136; ribosomal_L24; 1.
DR   SMART; SM00739; KOW; 1.
DR   SUPFAM; SSF50104; SSF50104; 1.
DR   TIGRFAMs; TIGR01079; rplX_bact; 1.
DR   PROSITE; PS01108; RIBOSOMAL_L24; 1.
PE   3: Inferred from homology;
DR   PRODOM; D4YYP0.
DR   SWISS-2DPAGE; D4YYP0.
KW   Complete proteome {ECO:0000313|Proteomes:UP000007753};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007753};
KW   Ribonucleoprotein {ECO:0000256|HAMAP-Rule:MF_01326,
KW   ECO:0000256|RuleBase:RU003477};
KW   Ribosomal protein {ECO:0000256|HAMAP-Rule:MF_01326,
KW   ECO:0000256|RuleBase:RU003477, ECO:0000313|EMBL:BAI95472.1};
KW   RNA-binding {ECO:0000256|HAMAP-Rule:MF_01326};
KW   rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01326}.
FT   DOMAIN        5     32       KOW. {ECO:0000259|SMART:SM00739}.
SQ   SEQUENCE   103 AA;  11119 MW;  F4336C3C5347C830 CRC64;
     MSAAKIKKGD KVVILAGKDK GRTGAVLQVL PKDDKVLVEG INVHARHRKP DQANPQGGIE
     RKPAPLHISN VAVADKDGKP TRVRFEDRDG KKVRVAVKSG EVL
//

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