(data stored in SCRATCH zone)

SWISSPROT: D4YYP3_SPHJU

ID   D4YYP3_SPHJU            Unreviewed;       131 AA.
AC   D4YYP3;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   07-JUN-2017, entry version 39.
DE   RecName: Full=30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302};
GN   Name=rpsH {ECO:0000256|HAMAP-Rule:MF_01302,
GN   ECO:0000313|EMBL:BAI95475.1};
GN   OrderedLocusNames=SJA_C1-06410 {ECO:0000313|EMBL:BAI95475.1};
OS   Sphingobium japonicum (strain NBRC 101211 / UT26S).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=452662 {ECO:0000313|EMBL:BAI95475.1, ECO:0000313|Proteomes:UP000007753};
RN   [1] {ECO:0000313|EMBL:BAI95475.1, ECO:0000313|Proteomes:UP000007753}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 101211 / UT26S {ECO:0000313|Proteomes:UP000007753};
RX   PubMed=20817768; DOI=10.1128/JB.00961-10;
RA   Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A.,
RA   Fukui S., Fujita N., Tsuda M.;
RT   "Complete genome sequence of the representative gamma-
RT   hexachlorocyclohexane-degrading bacterium Sphingobium japonicum
RT   UT26.";
RL   J. Bacteriol. 192:5852-5853(2010).
CC   -!- FUNCTION: One of the primary rRNA binding proteins, it binds
CC       directly to 16S rRNA central domain where it helps coordinate
CC       assembly of the platform of the 30S subunit. {ECO:0000256|HAMAP-
CC       Rule:MF_01302}.
CC   -!- SUBUNIT: Part of the 30S ribosomal subunit. Contacts proteins S5
CC       and S12. {ECO:0000256|HAMAP-Rule:MF_01302}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uS8 family.
CC       {ECO:0000256|HAMAP-Rule:MF_01302, ECO:0000256|RuleBase:RU003660}.
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DR   EMBL; AP010803; BAI95475.1; -; Genomic_DNA.
DR   RefSeq; WP_007686563.1; NC_014006.1.
DR   STRING; 452662.SJA_C1-06410; -.
DR   EnsemblBacteria; BAI95475; BAI95475; SJA_C1-06410.
DR   GeneID; 29272314; -.
DR   KEGG; sjp:SJA_C1-06410; -.
DR   eggNOG; ENOG4108UJY; Bacteria.
DR   eggNOG; COG0096; LUCA.
DR   HOGENOM; HOG000204095; -.
DR   KO; K02994; -.
DR   OMA; FDQGYIL; -.
DR   OrthoDB; POG091H027A; -.
DR   Proteomes; UP000007753; Chromosome 1.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-HAMAP.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-HAMAP.
DR   HAMAP; MF_01302_B; Ribosomal_S8_B; 1.
DR   InterPro; IPR000630; Ribosomal_S8.
DR   PANTHER; PTHR11758; PTHR11758; 1.
DR   Pfam; PF00410; Ribosomal_S8; 1.
DR   SUPFAM; SSF56047; SSF56047; 1.
DR   PROSITE; PS00053; RIBOSOMAL_S8; 1.
PE   3: Inferred from homology;
DR   PRODOM; D4YYP3.
DR   SWISS-2DPAGE; D4YYP3.
KW   Complete proteome {ECO:0000313|Proteomes:UP000007753};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007753};
KW   Ribonucleoprotein {ECO:0000256|HAMAP-Rule:MF_01302,
KW   ECO:0000256|RuleBase:RU003660};
KW   Ribosomal protein {ECO:0000256|HAMAP-Rule:MF_01302,
KW   ECO:0000256|RuleBase:RU003660, ECO:0000313|EMBL:BAI95475.1};
KW   RNA-binding {ECO:0000256|HAMAP-Rule:MF_01302};
KW   rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01302}.
SQ   SEQUENCE   131 AA;  14365 MW;  565C927A71285D81 CRC64;
     MALTDPLGDM LTRIRNGQQA KKDSVVSPAS KLRARVLDVL QREGYIRGYS EELLGNHPGL
     RIELKYFEGQ PAIKHVARVS KPGRRVYSGS KELPVIRNGL GITIVSTPRG VLSDAEAREQ
     NVGGEVLAEV F
//

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