(data stored in SCRATCH zone)

SWISSPROT: D4YYQ8_SPHJU

ID   D4YYQ8_SPHJU            Unreviewed;       464 AA.
AC   D4YYQ8;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   07-JUN-2017, entry version 41.
DE   SubName: Full=DNA polymerase bacteriophage-type {ECO:0000313|EMBL:BAI95490.1};
GN   Name=dpo {ECO:0000313|EMBL:BAI95490.1};
GN   OrderedLocusNames=SJA_C1-06560 {ECO:0000313|EMBL:BAI95490.1};
OS   Sphingobium japonicum (strain NBRC 101211 / UT26S).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=452662 {ECO:0000313|EMBL:BAI95490.1, ECO:0000313|Proteomes:UP000007753};
RN   [1] {ECO:0000313|EMBL:BAI95490.1, ECO:0000313|Proteomes:UP000007753}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 101211 / UT26S {ECO:0000313|Proteomes:UP000007753};
RX   PubMed=20817768; DOI=10.1128/JB.00961-10;
RA   Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A.,
RA   Fukui S., Fujita N., Tsuda M.;
RT   "Complete genome sequence of the representative gamma-
RT   hexachlorocyclohexane-degrading bacterium Sphingobium japonicum
RT   UT26.";
RL   J. Bacteriol. 192:5852-5853(2010).
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DR   EMBL; AP010803; BAI95490.1; -; Genomic_DNA.
DR   RefSeq; WP_013039187.1; NC_014006.1.
DR   ProteinModelPortal; D4YYQ8; -.
DR   STRING; 452662.SJA_C1-06560; -.
DR   EnsemblBacteria; BAI95490; BAI95490; SJA_C1-06560.
DR   GeneID; 29272329; -.
DR   KEGG; sjp:SJA_C1-06560; -.
DR   eggNOG; ENOG4105T12; Bacteria.
DR   eggNOG; COG1573; LUCA.
DR   HOGENOM; HOG000146841; -.
DR   KO; K02334; -.
DR   OMA; RYVAWFE; -.
DR   OrthoDB; POG091H04BF; -.
DR   Proteomes; UP000007753; Chromosome 1.
DR   CDD; cd10030; UDG_F4_TTUDGA_like; 1.
DR   Gene3D; 3.40.470.10; -; 1.
DR   InterPro; IPR023875; DNA_metab_put.
DR   InterPro; IPR025404; DUF4130.
DR   InterPro; IPR005273; Ura-DNA_glyco_family4.
DR   InterPro; IPR005122; Uracil-DNA_glycosylase-like.
DR   Pfam; PF13566; DUF4130; 1.
DR   Pfam; PF03167; UDG; 1.
DR   SMART; SM00986; UDG; 1.
DR   SUPFAM; SSF52141; SSF52141; 1.
DR   TIGRFAMs; TIGR03915; SAM_7_link_chp; 1.
DR   TIGRFAMs; TIGR00758; UDG_fam4; 1.
DR   TIGRFAMs; TIGR03914; UDG_fam_dom; 1.
PE   4: Predicted;
DR   PRODOM; D4YYQ8.
DR   SWISS-2DPAGE; D4YYQ8.
KW   Complete proteome {ECO:0000313|Proteomes:UP000007753};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007753}.
FT   DOMAIN      294    454       UDG. {ECO:0000259|SMART:SM00986}.
SQ   SEQUENCE   464 AA;  51943 MW;  246515EA064BF303 CRC64;
     MHRARLNGPD DFDGWRVAAR AFALAGTKPA DILWHIGDEG DLFAADEEPP PVGEVAFSVP
     RAFVELAERA ILHRDAERFA LLYALLVQVR DRPASLEDRA DPLVRRVEAL AKAVRRDMHK
     MRAFVRFREL ADAEGPRFVA WFEPDHHIVR ANAGFFARRF ASMRWSILTP ELSIHWDGDA
     LTEGPGATRR DAPAQDPVED IWKGYYAAIF NPARLKVGAM LSEMPRKYWR NLPEAALIPE
     LVAGAQSREA AMIATPPKPS ARQGNAAAAW SALREEAMGC TRCPLYRDTT QTVFGEGPVD
     APLMFIGEQP GDQEDLAGRP FVGPAGQLFD YALEEAGIDR RRAYITNAVK HFKHERRGKR
     RIHQTPETPE IQACRWWLTQ ELELVRPRII VALGATAGRA LLGKAVTISR VRGAPIALES
     GAQGWITVHP SYLLRVPDEA RKMEERKRFV AELREIGEQV KVLA
//

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