(data stored in SCRATCH zone)

SWISSPROT: D5EA17_METMS

ID   D5EA17_METMS            Unreviewed;       187 AA.
AC   D5EA17;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   11-DEC-2019, entry version 47.
DE   SubName: Full=DNA-directed RNA polymerase, subunit E {ECO:0000313|EMBL:ADE36018.1};
DE            EC=2.7.7.6 {ECO:0000313|EMBL:ADE36018.1};
GN   OrderedLocusNames=Mmah_0490 {ECO:0000313|EMBL:ADE36018.1};
OS   Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP).
OC   Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC   Methanosarcinales; Methanosarcinaceae; Methanohalophilus.
OX   NCBI_TaxID=547558 {ECO:0000313|EMBL:ADE36018.1, ECO:0000313|Proteomes:UP000001059};
RN   [1] {ECO:0000313|EMBL:ADE36018.1, ECO:0000313|Proteomes:UP000001059}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 35705 / DSM 5219 / SLP
RC   {ECO:0000313|Proteomes:UP000001059};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA   Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N.,
RA   Lykidis A., Saunders E., Brettin T., Detter J.C., Han C., Land M.,
RA   Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D.,
RA   Spring S., Schneider S., Schroeder M., Klenk H.-P., Eisen J.A.;
RT   "The complete genome of Methanohalophilus mahii DSM 5219.";
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP001994; ADE36018.1; -; Genomic_DNA.
DR   RefSeq; WP_013036961.1; NC_014002.1.
DR   EnsemblBacteria; ADE36018; ADE36018; Mmah_0490.
DR   GeneID; 8982631; -.
DR   KEGG; mmh:Mmah_0490; -.
DR   eggNOG; arCOG00675; Archaea.
DR   eggNOG; COG1095; LUCA.
DR   HOGENOM; HOG000229315; -.
DR   KO; K03049; -.
DR   OMA; MRQPGLG; -.
DR   OrthoDB; 117241at2157; -.
DR   BioCyc; MMAH547558:G1GHT-491-MONOMER; -.
DR   Proteomes; UP000001059; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-KW.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:InterPro.
DR   Gene3D; 3.30.1490.120; -; 1.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR036898; RNA_pol_Rpb7-like_N_sf.
DR   InterPro; IPR004519; RNAP_E/RPC8.
DR   InterPro; IPR005576; Rpb7-like_N.
DR   InterPro; IPR022967; S1_dom.
DR   InterPro; IPR003029; S1_domain.
DR   Pfam; PF00575; S1; 1.
DR   Pfam; PF03876; SHS2_Rpb7-N; 1.
DR   SMART; SM00316; S1; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   SUPFAM; SSF88798; SSF88798; 1.
DR   TIGRFAMs; TIGR00448; rpoE; 1.
DR   PROSITE; PS50126; S1; 1.
PE   4: Predicted;
DR   PRODOM; D5EA17.
DR   SWISS-2DPAGE; D5EA17.
KW   DNA-directed RNA polymerase {ECO:0000313|EMBL:ADE36018.1};
KW   Nucleotidyltransferase {ECO:0000313|EMBL:ADE36018.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001059};
KW   Transcription {ECO:0000313|EMBL:ADE36018.1};
KW   Transferase {ECO:0000313|EMBL:ADE36018.1}.
FT   DOMAIN          82..166
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
SQ   SEQUENCE   187 AA;  20774 MW;  E47EC38230320413 CRC64;
     MYKRMKLVDT VRVAPRLLAD DVRVSVKNAL KTKLEGRVDK KIGSVVAITD IDEIGEGHIL
     VGDGAVYYDA TFEAIMFIPT LQEVIEGEVV ETVEFGAFVS IGAMDGLLHV SQITDDFMSY
     DGKNGRLISK NVNKVLSEGD RVRARIVAVS INEREPRDSK IGLTMRQPAL GKLEWLDEQR
     KPNVTNK
//

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