(data stored in SCRATCH zone)

SWISSPROT: D5EA54_METMS

ID   D5EA54_METMS            Unreviewed;        78 AA.
AC   D5EA54;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   11-DEC-2019, entry version 51.
DE   RecName: Full=DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025};
DE            EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};
GN   Name=rpoH {ECO:0000256|HAMAP-Rule:MF_00025};
GN   OrderedLocusNames=Mmah_0528 {ECO:0000313|EMBL:ADE36055.1};
OS   Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP).
OC   Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC   Methanosarcinales; Methanosarcinaceae; Methanohalophilus.
OX   NCBI_TaxID=547558 {ECO:0000313|EMBL:ADE36055.1, ECO:0000313|Proteomes:UP000001059};
RN   [1] {ECO:0000313|EMBL:ADE36055.1, ECO:0000313|Proteomes:UP000001059}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 35705 / DSM 5219 / SLP
RC   {ECO:0000313|Proteomes:UP000001059};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA   Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N.,
RA   Lykidis A., Saunders E., Brettin T., Detter J.C., Han C., Land M.,
RA   Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D.,
RA   Spring S., Schneider S., Schroeder M., Klenk H.-P., Eisen J.A.;
RT   "The complete genome of Methanohalophilus mahii DSM 5219.";
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC       DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC       {ECO:0000256|HAMAP-Rule:MF_00025}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC         RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:11128, Rhea:RHEA-
CC         COMP:11129, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:83400;
CC         EC=2.7.7.6; Evidence={ECO:0000256|HAMAP-Rule:MF_00025};
CC   -!- SIMILARITY: Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase
CC       subunit family. {ECO:0000256|HAMAP-Rule:MF_00025}.
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DR   EMBL; CP001994; ADE36055.1; -; Genomic_DNA.
DR   RefSeq; WP_013036998.1; NC_014002.1.
DR   EnsemblBacteria; ADE36055; ADE36055; Mmah_0528.
DR   GeneID; 8982670; -.
DR   KEGG; mmh:Mmah_0528; -.
DR   eggNOG; arCOG04258; Archaea.
DR   eggNOG; COG2012; LUCA.
DR   HOGENOM; HOG000109413; -.
DR   KO; K03053; -.
DR   OMA; PKHEIVP; -.
DR   OrthoDB; 123463at2157; -.
DR   BioCyc; MMAH547558:G1GHT-531-MONOMER; -.
DR   Proteomes; UP000001059; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.90.940.20; -; 1.
DR   HAMAP; MF_00025; RNApol_RpoH_RPB5; 1.
DR   InterPro; IPR000783; RNA_pol_subH/Rpb5_C.
DR   InterPro; IPR039531; Rpb5-like.
DR   InterPro; IPR035913; RPB5-like_sf.
DR   InterPro; IPR020609; RpoH/RPB5.
DR   PANTHER; PTHR10535; PTHR10535; 1.
DR   Pfam; PF01191; RNA_pol_Rpb5_C; 1.
DR   SUPFAM; SSF55287; SSF55287; 1.
PE   3: Inferred from homology;
DR   PRODOM; D5EA54.
DR   SWISS-2DPAGE; D5EA54.
KW   DNA-directed RNA polymerase {ECO:0000256|HAMAP-Rule:MF_00025,
KW   ECO:0000256|SAAS:SAAS01076056, ECO:0000313|EMBL:ADE36055.1};
KW   Nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00025,
KW   ECO:0000313|EMBL:ADE36055.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001059};
KW   Transcription {ECO:0000256|HAMAP-Rule:MF_00025};
KW   Transferase {ECO:0000256|HAMAP-Rule:MF_00025, ECO:0000313|EMBL:ADE36055.1}.
FT   DOMAIN          5..76
FT                   /note="RNA_pol_Rpb5_C"
FT                   /evidence="ECO:0000259|Pfam:PF01191"
SQ   SEQUENCE   78 AA;  9089 MW;  EE6545D5B062DA89 CRC64;
     MSKFSLLDHE FIPRHEIIDE DEIKSVLKKY NIGREQLPKI KIEDPVIKEI GAEVGDIVKI
     TRKSQTAGEA LYYRYVIE
//

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