(data stored in SCRATCH zone)

SWISSPROT: D5UQJ9_TSUPD

ID   D5UQJ9_TSUPD            Unreviewed;       161 AA.
AC   D5UQJ9;
DT   13-JUL-2010, integrated into UniProtKB/TrEMBL.
DT   13-JUL-2010, sequence version 1.
DT   16-JAN-2019, entry version 36.
DE   SubName: Full=Putative GAF sensor protein {ECO:0000313|EMBL:ADG76832.1};
GN   OrderedLocusNames=Tpau_0178 {ECO:0000313|EMBL:ADG76832.1};
OS   Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 /
OS   NBRC 16120 / NCTC 13040) (Corynebacterium paurometabolum).
OC   Bacteria; Actinobacteria; Corynebacteriales; Tsukamurellaceae;
OC   Tsukamurella.
OX   NCBI_TaxID=521096 {ECO:0000313|EMBL:ADG76832.1, ECO:0000313|Proteomes:UP000001213};
RN   [1] {ECO:0000313|Proteomes:UP000001213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040
RC   {ECO:0000313|Proteomes:UP000001213};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E.,
RA   Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K.,
RA   Ivanova N., Mikhailova N., Munk A.C., Brettin T., Detter J.C.,
RA   Tapia R., Han C., Larimer F., Land M., Hauser L., Markowitz V.,
RA   Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Jando M., Brambilla E.,
RA   Klenk H.-P., Eisen J.A.;
RT   "The complete chromosome of Tsukamurella paurometabola DSM 20162.";
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADG76832.1, ECO:0000313|Proteomes:UP000001213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040
RC   {ECO:0000313|Proteomes:UP000001213};
RX   PubMed=21886861;
RA   Munk A.C., Lapidus A., Lucas S., Nolan M., Tice H., Cheng J.F.,
RA   Del Rio T.G., Goodwin L., Pitluck S., Liolios K., Huntemann M.,
RA   Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A.,
RA   Palaniappan K., Tapia R., Han C., Land M., Hauser L., Chang Y.J.,
RA   Jeffries C.D., Brettin T., Yasawong M., Brambilla E.M., Rohde M.,
RA   Sikorski J., Goker M., Detter J.C., Woyke T., Bristow J., Eisen J.A.,
RA   Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Tsukamurella paurometabola type strain
RT   (no. 33).";
RL   Stand. Genomic Sci. 4:342-351(2011).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001966; ADG76832.1; -; Genomic_DNA.
DR   STRING; 521096.Tpau_0178; -.
DR   EnsemblBacteria; ADG76832; ADG76832; Tpau_0178.
DR   KEGG; tpr:Tpau_0178; -.
DR   eggNOG; ENOG4108ZGC; Bacteria.
DR   eggNOG; COG1956; LUCA.
DR   HOGENOM; HOG000022909; -.
DR   KO; K08968; -.
DR   OMA; GICGQVA; -.
DR   Proteomes; UP000001213; Chromosome.
DR   Gene3D; 3.30.450.40; -; 1.
DR   InterPro; IPR000614; FRMsr_CS.
DR   InterPro; IPR003018; GAF.
DR   InterPro; IPR029016; GAF-like_dom_sf.
DR   Pfam; PF13185; GAF_2; 1.
DR   SMART; SM00065; GAF; 1.
DR   PROSITE; PS01320; UPF0067; 1.
PE   4: Predicted;
DR   PRODOM; D5UQJ9.
DR   SWISS-2DPAGE; D5UQJ9.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001213};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001213}.
FT   DOMAIN       32    161       GAF. {ECO:0000259|SMART:SM00065}.
SQ   SEQUENCE   161 AA;  17107 MW;  E07D674F736D6CCC CRC64;
     MSFSVPELSG SPAERYAELA GFASALIDGE PDRVANAANL SALVKATVPD LNWVGFYFFD
     GTELVVGPFQ GLPACIRIPL DRGVCGAAAR TGRTQRVDDV HAVADHIACD GATNSELVVP
     LVRDGELIGV FDLDSEKPAR FTDDDQRGLE AIAAVYLDSL R
//

If you have problems or comments...

PBIL Back to PBIL home page