(data stored in SCRATCH zone)

SWISSPROT: D5URD3_TSUPD

ID   D5URD3_TSUPD            Unreviewed;       214 AA.
AC   D5URD3;
DT   13-JUL-2010, integrated into UniProtKB/TrEMBL.
DT   13-JUL-2010, sequence version 1.
DT   08-MAY-2019, entry version 37.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ADG76986.1};
GN   OrderedLocusNames=Tpau_0343 {ECO:0000313|EMBL:ADG76986.1};
OS   Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 /
OS   NBRC 16120 / NCTC 13040) (Corynebacterium paurometabolum).
OC   Bacteria; Actinobacteria; Corynebacteriales; Tsukamurellaceae;
OC   Tsukamurella.
OX   NCBI_TaxID=521096 {ECO:0000313|EMBL:ADG76986.1, ECO:0000313|Proteomes:UP000001213};
RN   [1] {ECO:0000313|Proteomes:UP000001213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040
RC   {ECO:0000313|Proteomes:UP000001213};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E.,
RA   Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K.,
RA   Ivanova N., Mikhailova N., Munk A.C., Brettin T., Detter J.C.,
RA   Tapia R., Han C., Larimer F., Land M., Hauser L., Markowitz V.,
RA   Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Jando M., Brambilla E.,
RA   Klenk H.-P., Eisen J.A.;
RT   "The complete chromosome of Tsukamurella paurometabola DSM 20162.";
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADG76986.1, ECO:0000313|Proteomes:UP000001213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040
RC   {ECO:0000313|Proteomes:UP000001213};
RX   PubMed=21886861;
RA   Munk A.C., Lapidus A., Lucas S., Nolan M., Tice H., Cheng J.F.,
RA   Del Rio T.G., Goodwin L., Pitluck S., Liolios K., Huntemann M.,
RA   Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A.,
RA   Palaniappan K., Tapia R., Han C., Land M., Hauser L., Chang Y.J.,
RA   Jeffries C.D., Brettin T., Yasawong M., Brambilla E.M., Rohde M.,
RA   Sikorski J., Goker M., Detter J.C., Woyke T., Bristow J., Eisen J.A.,
RA   Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Tsukamurella paurometabola type strain
RT   (no. 33).";
RL   Stand. Genomic Sci. 4:342-351(2011).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001966; ADG76986.1; -; Genomic_DNA.
DR   RefSeq; WP_013125032.1; NC_014158.1.
DR   STRING; 521096.Tpau_0343; -.
DR   EnsemblBacteria; ADG76986; ADG76986; Tpau_0343.
DR   KEGG; tpr:Tpau_0343; -.
DR   eggNOG; ENOG4105GIV; Bacteria.
DR   eggNOG; COG3247; LUCA.
DR   HOGENOM; HOG000046136; -.
DR   OMA; AGLFRIY; -.
DR   OrthoDB; 1918376at2; -.
DR   BioCyc; TPAU521096:G1GKO-326-MONOMER; -.
DR   Proteomes; UP000001213; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   InterPro; IPR005325; DUF308_memb.
DR   Pfam; PF03729; DUF308; 3.
PE   4: Predicted;
DR   PRODOM; D5URD3.
DR   SWISS-2DPAGE; D5URD3.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001213};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001213};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     36     58       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     64     85       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     97    115       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    121    142       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    154    175       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    181    201       Helical. {ECO:0000256|SAM:Phobius}.
SQ   SEQUENCE   214 AA;  22910 MW;  0ADE8214E74E8D8B CRC64;
     MTTDTTSSAS APQEQPPRHS LVDEVRGYAS DVVTKVWQSV LGIGIVAIVL GAVILAWPSP
     TLRVVGVLFA IYLLLIGILQ LYTVFGPIKS ESNWWRFLTF ISGALSIVLS VLAFRSEGDS
     LVMLAIWIGV GWLIQGIVGF AVGLDLPNGT PHRILSIFAS ILFTIAGVIV VIYPYDAIAP
     LTYGTGIALI IIGLVQVVHA FQIRSSANKA IPQV
//

If you have problems or comments...

PBIL Back to PBIL home page